Zm00001e004710_P005 (Zm00001e004710)


Aliases : Zm00001e004710

Description : no hits & (original description: none)


Gene families : OG0001497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001497_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e004710_P005

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00270600 evm_27.TU.AmTr_v1... 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
AMTR_s00017p00234440 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g075755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117075 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21138 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32208 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g62066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0162.g054145 No alias not classified & original description: CDS=1-1809 0.04 OrthoFinder output from all 47 species
Cba_g10413 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g36170 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.33G026000.1 Ceric.33G026000 not classified & original description: pacid=50607594... 0.05 OrthoFinder output from all 47 species
Dac_g05708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20118 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g47761 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01023998001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_39308 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g05830.1 LOC_Os03g05830 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os10g30370.1 LOC_Os10g30370 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Lfl_g02031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430689g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g26171 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15339 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g41477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13992 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g35972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39366 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc11g005170.2.1 Solyc11g005170 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g10142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR029123 RBM39_linker 357 461
IPR000504 RRM_dom 468 520
IPR000504 RRM_dom 267 337
IPR000504 RRM_dom 175 237
No external refs found!