Zm00001e004571_P001 (Zm00001e004571)

Aliases : Zm00001e004571

Description : TNPO3 nucleocytoplasmic transport karyopherin

Gene families : OG0004537 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004537_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e004571_P001
Cluster	HCCA: Cluster_145

Target	Alias	Description	ECC score	Gene Family Method
AT5G62600	No alias	ARM repeat superfamily protein	0.08	OrthoFinder output from all 47 species
Aev_g24041	No alias	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.05	OrthoFinder output from all 47 species
Ala_g25081	No alias	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.04	OrthoFinder output from all 47 species
Als_g01133	No alias	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.07	OrthoFinder output from all 47 species
Aob_g33942	No alias	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.06	OrthoFinder output from all 47 species
Aop_g12624	No alias	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene04727.t1	Aspi01Gene04727	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene04731.t1	Aspi01Gene04731	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene04735.t1	Aspi01Gene04735	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.03	OrthoFinder output from all 47 species
Cba_g11571	No alias	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.02	OrthoFinder output from all 47 species
Ceric.07G095100.1	Ceric.07G095100	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.05	OrthoFinder output from all 47 species
Dcu_g43936	No alias	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.06	OrthoFinder output from all 47 species
Dde_g00929	No alias	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.04	OrthoFinder output from all 47 species
LOC_Os10g33770.1	LOC_Os10g33770	TNPO3 nucleocytoplasmic transport karyopherin	0.16	OrthoFinder output from all 47 species
Len_g16413	No alias	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.04	OrthoFinder output from all 47 species
Lfl_g36168	No alias	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.13	OrthoFinder output from all 47 species
MA_10432458g0010	No alias	Transportin MOS14 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_181638g0010	No alias	TNPO3 nucleocytoplasmic transport karyopherin	0.01	OrthoFinder output from all 47 species
MA_247862g0010	No alias	TNPO3 nucleocytoplasmic transport karyopherin	0.02	OrthoFinder output from all 47 species
Mp8g15200.1	No alias	TNPO3 nucleocytoplasmic transport karyopherin	0.04	OrthoFinder output from all 47 species
Msp_g00702	No alias	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.03	OrthoFinder output from all 47 species
Nbi_g01377	No alias	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.04	OrthoFinder output from all 47 species
Pp3c11_11570V3.1	Pp3c11_11570	ARM repeat superfamily protein	0.02	OrthoFinder output from all 47 species
Ppi_g22253	No alias	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002526	No alias	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.02	OrthoFinder output from all 47 species
Smo100270	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.02	OrthoFinder output from all 47 species
Solyc06g071200.3.1	Solyc06g071200	TNPO3 nucleocytoplasmic transport karyopherin	0.03	OrthoFinder output from all 47 species
Tin_g20641	No alias	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005801	cis-Golgi network	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0016197	endosomal transport	IEP	HCCA
BP	GO:0016482	cytosolic transport	IEP	HCCA
BP	GO:0016579	protein deubiquitination	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030118	clathrin coat	IEP	HCCA
CC	GO:0030119	AP-type membrane coat adaptor complex	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030125	clathrin vesicle coat	IEP	HCCA
CC	GO:0030126	COPI vesicle coat	IEP	HCCA
CC	GO:0030127	COPII vesicle coat	IEP	HCCA
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEP	HCCA
CC	GO:0030131	clathrin adaptor complex	IEP	HCCA
CC	GO:0030132	clathrin coat of coated pit	IEP	HCCA
CC	GO:0030906	retromer, cargo-selective complex	IEP	HCCA
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	HCCA
CC	GO:0033179	proton-transporting V-type ATPase, V0 domain	IEP	HCCA
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	HCCA
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA
BP	GO:1902531	regulation of intracellular signal transduction	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013598	Exportin-1/Importin-b-like	103	246
IPR001494	Importin-beta_N	30	91

External Links

No external refs found!

Zm00001e004571_P001 (Zm00001e004571)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation