Aliases : ARF16, Zm00001e004554
Description : transcription factor (ARF)
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00036p00215270 | ARF21,... | Auxin response factor 7 OS=Oryza sativa subsp. japonica | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00211p00025860 | MP, IAA24, ARF5,... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
AT2G33860 | ARF3, ETT | Transcriptional factor B3 family protein /... | 0.02 | OrthoFinder output from all 47 species | |
AT5G60450 | ARF4 | auxin response factor 4 | 0.03 | OrthoFinder output from all 47 species | |
Adi_g001040 | ARF11 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g011925 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g06750 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g08441 | ARF10 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g32218 | ARF16 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g33060 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0005.g009155 | ARF6 | ARF-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.30G022300.1 | ARF6, Ceric.30G022300 | ARF-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g05781 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g07132 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g09257 | ARF19, IAA22, ARF11 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g20778 | ARF14 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os04g36054.1 | ARF1, LOC_Os04g36054 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os04g56850.1 | MP, IAA24, ARF5,... | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os06g46410.1 | ARF6, LOC_Os06g46410 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Len_g11557 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Len_g28161 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g40471 | ARF1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g08351 | ARF16 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g33451 | ARF10 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g50454 | TIR5, MSG1,... | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g10257 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0019.g007919 | ARF19, IAA22, ARF11 | ARF-type transcription factor & original description: CDS=1-3501 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0032.g010740 | TIR5, MSG1,... | ARF-type transcription factor & original description: CDS=1-2400 | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0090.g018749 | ARF10 | not classified & original description: CDS=44-817 | 0.02 | OrthoFinder output from all 47 species | |
Sam_g16405 | No alias | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g19673 | No alias | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g28812 | No alias | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g096070.3.1 | ARF9, Solyc01g096070 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g075150.3.1 | ARF16, Solyc06g075150 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Solyc07g042260.4.1 | ARF19, IAA22,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Solyc08g008380.4.1 | ARF9, Solyc08g008380 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Spa_g55179 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
BP | GO:0009725 | response to hormone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
BP | GO:0007275 | multicellular organism development | IEP | HCCA |
BP | GO:0032501 | multicellular organismal process | IEP | HCCA |
BP | GO:0032502 | developmental process | IEP | HCCA |
MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
BP | GO:0048856 | anatomical structure development | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
No external refs found! |