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Aliases : Zm00001e004364
Description : transcription factor (Trihelix)
Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e004364_P002 | |
| Cluster | HCCA: Cluster_2 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G33240 | AT-GTL1, GTL1, AT-GTL2 | GT-2-like 1 | 0.05 | OrthoFinder output from all 47 species | |
| AT1G76880 | No alias | Duplicated homeodomain-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g050830 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g40404 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene07378.t2 | AT-GT2, GT2,... | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene69749.t1 | AT-GTL1, GTL1,... | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g36900 | AT-GTL1, GTL1, AT-GTL2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g08044 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g04858 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g24833 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g27401 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01019722001 | No alias | RNA biosynthesis.transcriptional activation.Trihelix... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01035465001 | No alias | RNA biosynthesis.transcriptional activation.Trihelix... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g01380.1 | AT-GT2, GT2,... | transcription factor (Trihelix) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os03g02240.1 | AT-GT2, GT2,... | transcription factor (Trihelix) | 0.13 | OrthoFinder output from all 47 species | |
| LOC_Os04g45750.1 | LOC_Os04g45750 | transcription factor (Trihelix) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os10g37240.4 | LOC_Os10g37240 | Trihelix transcription factor GT-2 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g19098 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g19944 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10427500g0020 | No alias | transcription factor (Trihelix) | 0.04 | OrthoFinder output from all 47 species | |
| MA_10427500g0030 | No alias | Trihelix transcription factor GTL1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10433499g0020 | AT-GT2, GT2 | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
| MA_47951g0010 | No alias | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
| MA_79619g0010 | No alias | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g60651 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g60919 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0157.g023745 | No alias | Trihelix-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g005380.2.1 | Solyc11g005380 | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g06396 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g24159 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g26467 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g49398 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |