Aliases : RNS3, Zm00001e004122
Description : Ribonuclease 3 OS=Arabidopsis thaliana (sp|p42815|rns3_arath : 286.0)
Gene families : OG0001771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001771_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e004122_P001 | |
Cluster | HCCA: Cluster_50 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G26820 | RNS3 | ribonuclease 3 | 0.04 | OrthoFinder output from all 47 species | |
Gb_30836 | ATRNS1, RNS1 | Ribonuclease 1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g33710.1 | RNS3, LOC_Os08g33710 | Extracellular ribonuclease LE OS=Solanum lycopersicum... | 0.03 | OrthoFinder output from all 47 species | |
MA_10433186g0020 | ATRNS1, RNS1 | Ribonuclease 1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
MA_9482356g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Ore_g03541 | ATRNS1, RNS1 | T2-type RNase *(RNS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc05g007940.3.1 | ATRNS1, RNS1,... | Intracellular ribonuclease LX OS=Solanum lycopersicum... | 0.03 | OrthoFinder output from all 47 species | |
Solyc05g007950.4.1 | ATRNS1, RNS1,... | Extracellular ribonuclease LE OS=Solanum lycopersicum... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
MF | GO:0033897 | ribonuclease T2 activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001568 | RNase_T2-like | 28 | 211 |
No external refs found! |