Zm00001e003799_P001 (AMY1, ATAMY1, Zm00001e003799)

Aliases : AMY1, ATAMY1, Zm00001e003799

Description : alpha amylase

Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e003799_P001
Cluster	HCCA: Cluster_73

Target	Alias	Description	ECC score	Gene Family Method
Adi_g021932	AMY3, ATAMY3	alpha amylase & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene40723.t1	AMY3, ATAMY3,...	alpha amylase & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g14308	AMY3, ATAMY3	alpha amylase & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01031740001	AMY1, ATAMY1	Carbohydrate metabolism.starch...	0.03	OrthoFinder output from all 47 species
Len_g16715	AMY1, ATAMY1	alpha amylase & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g00704	AMY3, ATAMY3	alpha amylase & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g20513	AMY3, ATAMY3	alpha amylase & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	IEA	Interproscan
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004556	alpha-amylase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
BP	GO:0006835	dicarboxylic acid transport	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0010181	FMN binding	IEP	HCCA
BP	GO:0015711	organic anion transport	IEP	HCCA
BP	GO:0015740	C4-dicarboxylate transport	IEP	HCCA
BP	GO:0015743	malate transport	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
BP	GO:0046942	carboxylic acid transport	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006047	Glyco_hydro_13_cat_dom	54	215
IPR012850	A-amylase_bs_C	371	429

External Links

No external refs found!