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  5. Zm00001e003436_P001

Zm00001e003436_P001 (NF-YC2, ATHAP5B,...)


Aliases : NF-YC2, ATHAP5B, HAP5B, Zm00001e003436

Description : component NF-YC of NF-Y transcription factor complex


Gene families : OG0001038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001038_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003436_P001
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Dac_g11845 HAP5A, NF-YC1, ATHAP5A component *(NF-YC) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
LOC_Os08g38780.1 NF-YC2, ATHAP5B,... component NF-YC of NF-Y transcription factor complex 0.06 OrthoFinder output from all 47 species
LOC_Os09g30310.1 NF-YC3, LOC_Os09g30310 component NF-YC of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Lfl_g02924 NF-YC2, ATHAP5B, HAP5B component *(NF-YC) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Pp3c9_5650V3.1 NF-YC2, ATHAP5B,... nuclear factor Y, subunit C4 0.02 OrthoFinder output from all 47 species
Zm00001e010042_P001 NF-YC2, ATHAP5B,... component NF-YC of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Zm00001e034481_P001 NF-YC3, Zm00001e034481 component NF-YC of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 85 148
No external refs found!