Zm00001e002934_P001 (Zm00001e002934)

Aliases : Zm00001e002934

Description : IMB1 nucleocytoplasmic import karyopherin

Gene families : OG0001300 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001300_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e002934_P001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00058p00157820	evm_27.TU.AmTr_v1...	Protein translocation.nucleus.nucleocytoplasmic...	0.06	OrthoFinder output from all 47 species
AMTR_s00058p00188470	evm_27.TU.AmTr_v1...	Protein translocation.nucleus.nucleocytoplasmic...	0.02	OrthoFinder output from all 47 species
AT3G08943	No alias	ARM repeat superfamily protein	0.03	OrthoFinder output from all 47 species
Adi_g057720	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.02	OrthoFinder output from all 47 species
Adi_g102317	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.02	OrthoFinder output from all 47 species
Ala_g09011	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.05	OrthoFinder output from all 47 species
Aspi01Gene56409.t1	Aspi01Gene56409	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.02	OrthoFinder output from all 47 species
Azfi_s0062.g035201	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.03	OrthoFinder output from all 47 species
Cba_g02724	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021348.90	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.04	OrthoFinder output from all 47 species
Cre01.g034000	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.06	OrthoFinder output from all 47 species
Dcu_g07137	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01038575001	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.05	OrthoFinder output from all 47 species
Gb_35028	No alias	IMB1 nucleocytoplasmic import karyopherin	0.05	OrthoFinder output from all 47 species
LOC_Os12g38110.1	LOC_Os12g38110	IMB1 nucleocytoplasmic import karyopherin	0.07	OrthoFinder output from all 47 species
Len_g02910	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.03	OrthoFinder output from all 47 species
MA_12771g0010	No alias	IMB1 nucleocytoplasmic import karyopherin	0.08	OrthoFinder output from all 47 species
Mp6g11310.1	No alias	IMB1 nucleocytoplasmic import karyopherin	0.1	OrthoFinder output from all 47 species
Msp_g12557	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.04	OrthoFinder output from all 47 species
Nbi_g30291	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.03	OrthoFinder output from all 47 species
Ore_g18337	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.03	OrthoFinder output from all 47 species
Ore_g30274	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.02	OrthoFinder output from all 47 species
Pir_g13609	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.02	OrthoFinder output from all 47 species
Pir_g15801	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.04	OrthoFinder output from all 47 species
Pnu_g11141	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.02	OrthoFinder output from all 47 species
Pp3c11_26710V3.1	Pp3c11_26710	ARM repeat superfamily protein	0.02	OrthoFinder output from all 47 species
Smo124593	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.03	OrthoFinder output from all 47 species
Smo158150	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.03	OrthoFinder output from all 47 species
Smo185511	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.03	OrthoFinder output from all 47 species
Solyc06g052030.3.1	Solyc06g052030	IMB1 nucleocytoplasmic import karyopherin	0.07	OrthoFinder output from all 47 species
Spa_g12818	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.05	OrthoFinder output from all 47 species
Tin_g04168	No alias	nucleocytoplasmic import karyopherin *(IMB1) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
BP	GO:0006606	protein import into nucleus	IEP	HCCA
BP	GO:0006913	nucleocytoplasmic transport	IEP	HCCA
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	HCCA
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030126	COPI vesicle coat	IEP	HCCA
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
BP	GO:0034504	protein localization to nucleus	IEP	HCCA
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	HCCA
BP	GO:0051169	nuclear transport	IEP	HCCA
BP	GO:0051170	import into nucleus	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
MF	GO:0061608	nuclear import signal receptor activity	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
MF	GO:0140104	molecular carrier activity	IEP	HCCA
MF	GO:0140142	nucleocytoplasmic carrier activity	IEP	HCCA
BP	GO:1902531	regulation of intracellular signal transduction	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001494	Importin-beta_N	23	102
IPR000357	HEAT	220	248

External Links

No external refs found!

Zm00001e002934_P001 (Zm00001e002934)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation