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  5. Zm00001e002499_P001

Zm00001e002499_P001 (Zm00001e002499)


Aliases : Zm00001e002499

Description : calcium-permeable channel (OSCA)


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e002499_P001

Target Alias Description ECC score Gene Family Method Actions
AT1G11960 No alias ERD (early-responsive to dehydration stress) family protein 0.02 OrthoFinder output from all 47 species
AT3G21620 No alias ERD (early-responsive to dehydration stress) family protein 0.02 OrthoFinder output from all 47 species
Aev_g04827 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09198 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g11705 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26928 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g21426 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05739 No alias calcium-permeable channel *(OSCA) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g12509 No alias calcium-permeable channel *(OSCA) & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g28230 ERD4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011097001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.02 OrthoFinder output from all 47 species
GSVIVT01011543001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.02 OrthoFinder output from all 47 species
GSVIVT01012666001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.04 OrthoFinder output from all 47 species
GSVIVT01021562001 ERD4 Solute transport.channels.OSCA calcium-permeable channel 0.02 OrthoFinder output from all 47 species
Gb_08557 ERD4 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
Gb_09904 HYP1, ATHYP1 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
LOC_Os07g05570.1 ERD4, LOC_Os07g05570 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
Len_g28172 No alias calcium-permeable channel *(OSCA) & original description: none 0.01 OrthoFinder output from all 47 species
MA_10551g0010 No alias Protein OSCA1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp8g07950.1 ERD4 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
Msp_g15893 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g14172 ERD4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g27838 No alias calcium-permeable channel *(OSCA) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g17063 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13626 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000924 ERD4 calcium-permeable channel *(OSCA) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015889 No alias calcium-permeable channel *(OSCA) & original... 0.02 OrthoFinder output from all 47 species
Sam_g38739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g064810.4.1 Solyc09g064810 calcium-permeable channel (OSCA) 0.04 OrthoFinder output from all 47 species
Spa_g26774 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e020766_P002 Zm00001e020766 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR027815 CSC1/OSCA1-like_cyt 200 362
IPR032880 Csc1/OSCA1-like_N 7 179
IPR003864 CSC1/OSCA1-like_7TM 373 645
No external refs found!