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  5. Zm00001e002375_P001

Zm00001e002375_P001 (Zm00001e002375)


Aliases : Zm00001e002375

Description : transcription factor (Trihelix)


Gene families : OG0002113 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e002375_P001
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene40964.t1 FIP2, Aspi01Gene40964 Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40964.t2 FIP2, Aspi01Gene40964 Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05375 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17678 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26810 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g45940.1 LOC_Os04g45940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g41460.1 LOC_Os10g41460 transcription factor (Trihelix) 0.05 OrthoFinder output from all 47 species
Lfl_g26796 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g28429 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g088820.2.1 Solyc01g088820 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Zm00001e024316_P001 Zm00001e024316 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!