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  5. Zm00001e002340_P001

Zm00001e002340_P001 (GN, EMB30, VAN7,...)


Aliases : GN, EMB30, VAN7, Zm00001e002340

Description : GBF-type ARF-GTPase guanyl-nucleotide exchange factor


Gene families : OG0002212 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002212_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e002340_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00269600 GN, EMB30, VAN7,... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
AT5G39500 GNL1, ERMO1 GNOM-like 1 0.09 OrthoFinder output from all 47 species
Adi_g016413 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.02 OrthoFinder output from all 47 species
Adi_g020078 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.04 OrthoFinder output from all 47 species
Ala_g07768 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.04 OrthoFinder output from all 47 species
Ala_g12642 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.03 OrthoFinder output from all 47 species
Als_g21608 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.04 OrthoFinder output from all 47 species
Azfi_s0087.g042331 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.04 OrthoFinder output from all 47 species
Azfi_s0094.g043397 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.03 OrthoFinder output from all 47 species
Ceric.02G006600.1 GN, EMB30, VAN7,... ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.03 OrthoFinder output from all 47 species
Ceric.15G051500.1 GN, EMB30, VAN7,... ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.05 OrthoFinder output from all 47 species
Cre07.g334100 GN, EMB30, VAN7 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 OrthoFinder output from all 47 species
Dcu_g39421 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.03 OrthoFinder output from all 47 species
Dde_g00978 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01013109001 GN, EMB30, VAN7 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Gb_01979 GN, EMB30, VAN7 GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.02 OrthoFinder output from all 47 species
Gb_26378 GN, EMB30, VAN7 GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.03 OrthoFinder output from all 47 species
LOC_Os02g22090.1 GN, EMB30, VAN7,... GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.12 OrthoFinder output from all 47 species
Lfl_g26981 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.05 OrthoFinder output from all 47 species
MA_10434215g0010 GN, EMB30, VAN7 GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 OrthoFinder output from all 47 species
MA_50146g0010 GN, EMB30, VAN7 GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.08 OrthoFinder output from all 47 species
Mp3g25100.1 GN, EMB30, VAN7 GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.03 OrthoFinder output from all 47 species
Nbi_g10932 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.02 OrthoFinder output from all 47 species
Ore_g06949 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.02 OrthoFinder output from all 47 species
Pir_g18889 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.03 OrthoFinder output from all 47 species
Smo101122 GN, EMB30, VAN7 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Solyc05g013040.3.1 GN, EMB30, VAN7,... GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.03 OrthoFinder output from all 47 species
Tin_g11111 GN, EMB30, VAN7 ARF-GTPase guanyl-nucleotide exchange factor *(GBF) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0032012 regulation of ARF protein signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000904 Sec7_dom 543 726
IPR032691 Mon2/Sec7/BIG1-like_HUS 296 457
No external refs found!