Zm00001e001847_P001 (KCS12, Zm00001e001847)

Aliases : KCS12, Zm00001e001847

Description : 3-ketoacyl-CoA synthase (KCS)

Gene families : OG0012186 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012186_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e001847_P001
Cluster	HCCA: Cluster_66

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00034p00045070	KCS12,...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	OrthoFinder output from all 47 species
AMTR_s00178p00018030	KCS12,...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.05	OrthoFinder output from all 47 species
AT1G07720	KCS3	3-ketoacyl-CoA synthase 3	0.06	OrthoFinder output from all 47 species
AT2G28630	KCS12	3-ketoacyl-CoA synthase 12	0.05	OrthoFinder output from all 47 species
AT5G04530	KCS19	3-ketoacyl-CoA synthase 19	0.05	OrthoFinder output from all 47 species
GSVIVT01005975001	KCS12	Lipid metabolism.fatty acid synthesis.fatty acid...	0.05	OrthoFinder output from all 47 species
GSVIVT01025052001	KCS12	Lipid metabolism.fatty acid synthesis.fatty acid...	0.04	OrthoFinder output from all 47 species
LOC_Os02g56860.1	KCS12, LOC_Os02g56860	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
LOC_Os03g26530.1	KCS12, LOC_Os03g26530	3-ketoacyl-CoA synthase (KCS)	0.04	OrthoFinder output from all 47 species
LOC_Os10g33370.1	KCS12, LOC_Os10g33370	3-ketoacyl-CoA synthase (KCS)	0.04	OrthoFinder output from all 47 species
Solyc11g072980.1.1	KCS3, Solyc11g072980	3-ketoacyl-CoA synthase (KCS)	0.07	OrthoFinder output from all 47 species
Solyc11g072990.1.1	KCS3, Solyc11g072990	3-ketoacyl-CoA synthase (KCS)	0.08	OrthoFinder output from all 47 species
Zm00001e004603_P002	KCS12, Zm00001e004603	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
Zm00001e016197_P001	KCS12, Zm00001e016197	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009733	response to auxin	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013601	FAE1_typ3_polyketide_synth	51	338
IPR013747	ACP_syn_III_C	368	449

External Links

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Zm00001e001847_P001 (KCS12, Zm00001e001847)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation