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  5. Zm00001e001677_P001

Zm00001e001677_P001 (Zm00001e001677)


Aliases : Zm00001e001677

Description : NUG2 LSU processome regulatory GTPase


Gene families : OG0005924 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005924_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001677_P001

Target Alias Description ECC score Gene Family Method Actions
Adi_g007415 No alias regulatory GTPase (NUG2) of LSU processome & original... 0.02 OrthoFinder output from all 47 species
Aop_g12078 No alias regulatory GTPase (NUG2) of LSU processome & original... 0.02 OrthoFinder output from all 47 species
Cre07.g340050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Dac_g17916 No alias regulatory GTPase (NUG2) of LSU processome & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01014369001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Lfl_g13104 No alias regulatory GTPase (NUG2) of LSU processome & original... 0.03 OrthoFinder output from all 47 species
MA_18331g0010 No alias Nuclear/nucleolar GTPase 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp2g16460.1 No alias NUG2 LSU processome regulatory GTPase 0.03 OrthoFinder output from all 47 species
Solyc07g063270.3.1 Solyc07g063270 NUG2 LSU processome regulatory GTPase 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0018142 protein-DNA covalent cross-linking IEP HCCA
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR012971 NOG2_N_dom 49 173
IPR006073 GTP-bd 317 395
No external refs found!