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  5. Zm00001e001600_P001

Zm00001e001600_P001 (FUM1, Zm00001e001600)


Aliases : FUM1, Zm00001e001600

Description : fumarase


Gene families : OG0004044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004044_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001600_P001

Target Alias Description ECC score Gene Family Method Actions
AT2G47510 FUM1 fumarase 1 0.08 OrthoFinder output from all 47 species
Dcu_g02907 FUM1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g21950.1 FUM1, LOC_Os03g21950 fumarase 0.15 OrthoFinder output from all 47 species
Lfl_g01697 FUM1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Mp6g19990.1 FUM1 fumarase 0.04 OrthoFinder output from all 47 species
Pp3c23_19500V3.1 FUM1, Pp3c23_19500 FUMARASE 2 0.01 OrthoFinder output from all 47 species
Smo113300 FUM1 Cellular respiration.tricarboxylic acid cycle.fumarase 0.02 OrthoFinder output from all 47 species
Solyc09g075450.3.1 FUM1, Solyc09g075450 fumarase 0.06 OrthoFinder output from all 47 species
Spa_g06276 FUM1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12353 FUM1 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR022761 Fumarate_lyase_N 103 433
IPR018951 Fumarase_C_C 499 552
No external refs found!