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  5. Zm00001e001013_P003

Zm00001e001013_P003 (Zm00001e001013)


Aliases : Zm00001e001013

Description : no description available(sp|q84wt5|xyn5l_arath : 305.0)


Gene families : OG0001478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001478_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001013_P003

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00086p00056140 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G10050 No alias glycosyl hydrolase family 10 protein /... 0.03 OrthoFinder output from all 47 species
Aspi01Gene08622.t1 Aspi01Gene08622 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007415 ATXYN1, RXF12 endo-beta-1,4-xylanase & original description: CDS=41-2794 0.04 OrthoFinder output from all 47 species
Dde_g13207 ATXYN1, RXF12 endo-beta-1,4-xylanase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037825001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01037832001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01037833001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os01g04290.1 LOC_Os01g04290 endo-beta-1,4-xylanase 0.02 OrthoFinder output from all 47 species
LOC_Os01g04300.1 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.03 OrthoFinder output from all 47 species
LOC_Os03g10440.1 LOC_Os03g10440 no description available(sp|a0a1p8b8f8|xyn5_arath : 380.0) 0.04 OrthoFinder output from all 47 species
LOC_Os03g10478.1 LOC_Os03g10478 no description available(sp|q84wt5|xyn5l_arath : 394.0) 0.03 OrthoFinder output from all 47 species
LOC_Os03g14010.1 LOC_Os03g14010 no description available(sp|q84wt5|xyn5l_arath : 305.0) 0.04 OrthoFinder output from all 47 species
LOC_Os05g23924.1 LOC_Os05g23924 no description available(sp|q84wt5|xyn5l_arath : 299.0) 0.07 OrthoFinder output from all 47 species
LOC_Os05g25560.1 LOC_Os05g25560 endo-beta-1,4-xylanase 0.03 OrthoFinder output from all 47 species
LOC_Os07g27320.1 LOC_Os07g27320 endo-beta-1,4-xylanase 0.03 OrthoFinder output from all 47 species
Ore_g27615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006025 No alias not classified & original description: CDS=1-2073 0.03 OrthoFinder output from all 47 species
Smo111304 ATXYN1, RXF12 Cell wall.hemicellulose.xylan.modification and... 0.03 OrthoFinder output from all 47 species
Solyc10g055370.2.1 Solyc10g055370 no description available(sp|a0a1p8b8f8|xyn5_arath : 301.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
InterPro domains Description Start Stop
IPR001000 GH10_dom 222 480
No external refs found!