Zm00001e000558_P003 (Zm00001e000558)

Aliases : Zm00001e000558

Description : transcription factor (AP2)

Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e000558_P003

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00035p00205430	AP2, FLO2, FL1,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
AT5G67180	TOE3	target of early activation tagged (EAT) 3	0.03	OrthoFinder output from all 47 species
Adi_g014885	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Adi_g018198	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Adi_g058146	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g36629	BBM	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aob_g17577	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.05	OrthoFinder output from all 47 species
Aob_g21593	No alias	RAM1-dependent transcription factor *(WRI5) & original...	0.03	OrthoFinder output from all 47 species
Aob_g27594	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene38120.t1	PLT2, Aspi01Gene38120	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Azfi_s0207.g057931	WRI1, ATWRI1, ASML1, WRI	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Cba_g52321	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.09	OrthoFinder output from all 47 species
Ceric.03G054600.1	ADAP, Ceric.03G054600	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ceric.12G002600.1	Ceric.12G002600	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ceric.13G003200.1	RAP2.7, TOE1,...	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ceric.15G054600.1	PLT2, Ceric.15G054600	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ceric.1Z150100.1	AP2, FLO2, FL1,...	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ceric.31G036600.1	Ceric.31G036600	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Dac_g06510	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Dcu_g12320	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g33754	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Dcu_g41387	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ehy_g24256	RAP2.7, TOE1	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01016764001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	OrthoFinder output from all 47 species
GSVIVT01023697001	ADAP	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	OrthoFinder output from all 47 species
Gb_18139	No alias	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species
LOC_Os05g03040.1	RAP2.7, TOE1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
LOC_Os06g43220.1	AP2, FLO2, FL1,...	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species
Lfl_g05865	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Lfl_g17116	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
MA_10005612g0010	ADAP	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_121578g0010	DRG, CKC, CKC1, ANT	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species
MA_30905g0010	WRI1, ATWRI1, ASML1, WRI	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
MA_95471g0010	No alias	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
MA_98095g0010	No alias	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Msp_g32091	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Nbi_g09452	BBM	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Pnu_g21617	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Pp3c22_17870V3.1	Pp3c22_17870	target of early activation tagged (EAT) 2	0.01	OrthoFinder output from all 47 species
Ppi_g19044	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ppi_g40008	BBM	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ppi_g64020	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Solyc03g123430.4.1	Solyc03g123430	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Solyc04g049800.3.1	RAP2.7, TOE1,...	transcription factor (AP2)	0.05	OrthoFinder output from all 47 species
Solyc09g007260.4.1	RAP2.7, TOE1,...	transcription factor (AP2)	0.06	OrthoFinder output from all 47 species
Spa_g07247	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Spa_g10818	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Spa_g38473	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Spa_g38474	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Spa_g50963	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Spa_g51078	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g12768	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Tin_g24385	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Zm00001e027593_P003	AP2, FLO2, FL1,...	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species
Zm00001e037501_P005	AP2, FLO2, FL1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	271	329
IPR001471	AP2/ERF_dom	374	423

External Links

No external refs found!

Zm00001e000558_P003 (Zm00001e000558)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation