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Aliases : Zm00001e000449
Description : Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum (sp|p09444|lea34_goshi : 140.0)
Gene families : OG0003000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003000_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e000449_P001 | |
| Cluster | HCCA: Cluster_133 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G22490 | No alias | Seed maturation protein | 0.14 | OrthoFinder output from all 47 species | |
| AT3G22500 | ATECP31 | Seed maturation protein | 0.15 | OrthoFinder output from all 47 species | |
| Aev_g39096 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g37832 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011458 | No alias | not classified & original description: CDS=379-1194 | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.07G017000.1 | Ceric.07G017000 | not classified & original description: pacid=50628070... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.11G015400.1 | Ceric.11G015400 | not classified & original description: pacid=50596852... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.12G023800.1 | RAB28, ATRAB28,... | not classified & original description: pacid=50600510... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.32G026700.1 | Ceric.32G026700 | not classified & original description: pacid=50598394... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g09016 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g27296 | RAB28, ATRAB28 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g47990 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01001170001 | No alias | Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01017985001 | No alias | Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum | 0.12 | OrthoFinder output from all 47 species | |
| GSVIVT01021881001 | No alias | Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os03g06360.1 | LOC_Os03g06360 | Late embryogenesis abundant protein D-34 OS=Gossypium... | 0.22 | OrthoFinder output from all 47 species | |
| LOC_Os03g53610.1 | LOC_Os03g53610 | Late embryogenesis abundant protein D-34 OS=Gossypium... | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os03g53620.1 | ATECP31, LOC_Os03g53620 | no hits & (original description: none) | 0.23 | OrthoFinder output from all 47 species | |
| LOC_Os06g23350.1 | LOC_Os06g23350 | Late embryogenesis abundant protein D-34 OS=Gossypium... | 0.21 | OrthoFinder output from all 47 species | |
| LOC_Os10g29570.1 | RAB28, ATRAB28,... | no hits & (original description: none) | 0.18 | OrthoFinder output from all 47 species | |
| Len_g40603 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_14118g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_216273g0010 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| MA_326206g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_49897g0020 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Mp5g18240.1 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g06630.1 | No alias | Late embryogenesis abundant protein 31 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g14470 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g41870 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g09444 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g55933 | RAB28, ATRAB28 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g56546 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo84789 | No alias | Late embryogenesis abundant protein 31 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g065360.4.1 | Solyc09g065360 | Late embryogenesis abundant protein 31 OS=Arabidopsis... | 0.09 | OrthoFinder output from all 47 species | |
| Solyc09g082100.3.1 | Solyc09g082100 | Late embryogenesis abundant protein 31 OS=Arabidopsis... | 0.11 | OrthoFinder output from all 47 species | |
| Solyc09g082110.4.1 | Solyc09g082110 | Late embryogenesis abundant protein D-34 OS=Gossypium... | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g11729 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |