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  5. Zm00001e000387_P004

Zm00001e000387_P004 (UBC4, ATUBC4, Zm00001e000387)


Aliases : UBC4, ATUBC4, Zm00001e000387

Description : ubiquitin-conjugating E2 protein


Gene families : OG0001369 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001369_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e000387_P004
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00214490 UBC5,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT1G63800 UBC5 ubiquitin-conjugating enzyme 5 0.03 OrthoFinder output from all 47 species
AT5G41340 UBC4, ATUBC4 ubiquitin conjugating enzyme 4 0.03 OrthoFinder output from all 47 species
Adi_g057912 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Adi_g074542 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Adi_g074543 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Adi_g074544 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.04 OrthoFinder output from all 47 species
Als_g04664 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.04 OrthoFinder output from all 47 species
Als_g18194 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Als_g47212 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Ceric.04G027100.1 UBC5, Ceric.04G027100 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.09 OrthoFinder output from all 47 species
Cre01.g027200 UBC5 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Dac_g45590 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.04 OrthoFinder output from all 47 species
Mp5g01860.1 UBC5 ubiquitin-conjugating E2 protein 0.02 OrthoFinder output from all 47 species
Msp_g30679 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g02606 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Solyc01g094810.3.1 UBC5, Solyc01g094810 ubiquitin-conjugating E2 protein 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006449 regulation of translational termination IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0045901 positive regulation of translational elongation IEP HCCA
BP GO:0045905 positive regulation of translational termination IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 10 142
No external refs found!