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  5. Zm00001e000341_P001

Zm00001e000341_P001 (Zm00001e000341)


Aliases : Zm00001e000341

Description : component RPL21 of LSU proteome component


Gene families : OG0001239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e000341_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00252940 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 OrthoFinder output from all 47 species
AMTR_s00024p00178920 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 OrthoFinder output from all 47 species
AT1G09590 No alias Translation protein SH3-like family protein 0.34 OrthoFinder output from all 47 species
AT1G09690 No alias Translation protein SH3-like family protein 0.28 OrthoFinder output from all 47 species
AT1G57660 No alias Translation protein SH3-like family protein 0.08 OrthoFinder output from all 47 species
Adi_g043900 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Adi_g043901 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Adi_g097781 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Adi_g126730 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Aev_g05703 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ala_g03009 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g03083 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ala_g12117 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Als_g08627 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Als_g55086 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Als_g62927 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aob_g03881 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Aop_g05077 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.22 OrthoFinder output from all 47 species
Aop_g09546 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.24 OrthoFinder output from all 47 species
Aop_g17674 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g35273 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g54674 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Azfi_s0005.g009168 No alias not classified & original description: CDS=164-400 0.03 OrthoFinder output from all 47 species
Azfi_s0204.g057708 No alias not classified & original description: CDS=1-432 0.02 OrthoFinder output from all 47 species
Azfi_s0509.g074695 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Cba_g09458 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g20939 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Cba_g21453 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cba_g68360 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.07G094100.1 Ceric.07G094100 component *(eL21) of large ribosomal-subunit (LSU)... 0.22 OrthoFinder output from all 47 species
Ceric.10G032200.1 Ceric.10G032200 component *(eL21) of large ribosomal-subunit (LSU)... 0.16 OrthoFinder output from all 47 species
Ceric.24G006900.1 Ceric.24G006900 component *(eL21) of large ribosomal-subunit (LSU)... 0.11 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000640.5 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.16 OrthoFinder output from all 47 species
Cre06.g278135 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.34 OrthoFinder output from all 47 species
Dac_g13798 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.19 OrthoFinder output from all 47 species
Dac_g25425 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Dcu_g14505 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Dcu_g30991 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.11 OrthoFinder output from all 47 species
Dde_g13227 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01001130001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 OrthoFinder output from all 47 species
GSVIVT01033444001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 OrthoFinder output from all 47 species
GSVIVT01033455001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.16 OrthoFinder output from all 47 species
Gb_09077 No alias component RPL21 of LSU proteome component 0.14 OrthoFinder output from all 47 species
LOC_Os03g04750.1 LOC_Os03g04750 component RPL21 of LSU proteome component 0.28 OrthoFinder output from all 47 species
LOC_Os10g32820.1 LOC_Os10g32820 component RPL21 of LSU proteome component 0.17 OrthoFinder output from all 47 species
Len_g11206 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Lfl_g06844 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Lfl_g16262 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Lfl_g32126 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
MA_40819g0010 No alias component RPL21 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Mp6g01390.1 No alias component RPL21 of LSU proteome component 0.27 OrthoFinder output from all 47 species
Msp_g03349 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Msp_g33917 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Msp_g34119 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Msp_g34423 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Nbi_g06034 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Nbi_g17034 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Ore_g18005 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Pir_g17475 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pir_g54168 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pp3c12_9320V3.1 Pp3c12_9320 Translation protein SH3-like family protein 0.2 OrthoFinder output from all 47 species
Pp3c13_2360V3.1 Pp3c13_2360 Translation protein SH3-like family protein 0.09 OrthoFinder output from all 47 species
Pp3c3_5550V3.1 Pp3c3_5550 Translation protein SH3-like family protein 0.14 OrthoFinder output from all 47 species
Pp3c4_21520V3.1 Pp3c4_21520 Translation protein SH3-like family protein 0.14 OrthoFinder output from all 47 species
Ppi_g02594 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Ppi_g18069 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ppi_g20555 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ppi_g21572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g44052 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0151.g023446 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g05923 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Sam_g15602 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.12 OrthoFinder output from all 47 species
Sam_g38886 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.12 OrthoFinder output from all 47 species
Sam_g52957 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Smo170832 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
Solyc10g078960.2.1 Solyc10g078960 component RPL21 of LSU proteome component 0.25 OrthoFinder output from all 47 species
Solyc10g080590.2.1 Solyc10g080590 component RPL21 of LSU proteome component 0.18 OrthoFinder output from all 47 species
Spa_g21282 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.18 OrthoFinder output from all 47 species
Spa_g21283 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.19 OrthoFinder output from all 47 species
Spa_g29343 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g29344 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g29345 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Spa_g52174 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.15 OrthoFinder output from all 47 species
Tin_g29829 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.17 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001147 Ribosomal_L21e 1 101
No external refs found!