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  5. Gb_41770

Gb_41770


Description : GTPase activation accessory protein (RanBP1)


Gene families : OG0001732 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001732_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_41770

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0009.g011820 RANBP1 Ran-activation accessory protein *(RanBP1) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000789.36 SIRANBP Protein translocation.nucleus.nucleocytoplasmic... 0.01 OrthoFinder output from all 47 species
Cre09.g394450 RANBP1 Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Dac_g08119 RANBP1 Ran-activation accessory protein *(RanBP1) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01003935001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
LOC_Os05g28290.1 LOC_Os05g28290 GTPase activation accessory protein (RanBP1) 0.04 OrthoFinder output from all 47 species
Mp2g00160.1 No alias GTPase activation accessory protein (RanBP1) 0.02 OrthoFinder output from all 47 species
Pir_g00331 RANBP1 Ran-activation accessory protein *(RanBP1) & original... 0.02 OrthoFinder output from all 47 species
Solyc06g082120.4.1 Solyc06g082120 GTPase activation accessory protein (RanBP1) 0.04 OrthoFinder output from all 47 species
Solyc08g062660.3.1 RANBP1, Solyc08g062660 GTPase activation accessory protein (RanBP1) 0.03 OrthoFinder output from all 47 species
Spa_g07189 No alias Ran-activation accessory protein *(RanBP1) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0046907 intracellular transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR000156 Ran_bind_dom 45 162
No external refs found!