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  5. Gb_41693

Gb_41693


Description : no hits & (original description: none)


Gene families : OG0007180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_41693
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00046000 evm_27.TU.AmTr_v1... Rho-N domain-containing protein 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
AT1G06190 No alias Rho termination factor 0.08 OrthoFinder output from all 47 species
Cba_g12295 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.25G063000.1 Ceric.25G063000 not classified & original description: pacid=50593735... 0.07 OrthoFinder output from all 47 species
Dcu_g10479 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01028346001 No alias Rho-N domain-containing protein 1, chloroplastic... 0.06 OrthoFinder output from all 47 species
LOC_Os03g08480.1 LOC_Os03g08480 SAP-like protein BP-73 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_137050g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g29206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo445504 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc09g025260.4.1 Solyc09g025260 Rho-N domain-containing protein 1, chloroplastic... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000702 oxidized base lesion DNA N-glycosylase activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!