Description : ER tubulae formation factor (RHD3/RL)
Gene families : OG0001619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001619_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00271330 | evm_27.TU.AmTr_v1... | Protein ROOT HAIR DEFECTIVE 3 homolog 2 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
AT3G13870 | RHD3 | Root hair defective 3 GTP-binding protein (RHD3) | 0.05 | OrthoFinder output from all 47 species | |
Als_g33558 | No alias | ER tubulae formation factor *(RHD3/RL) & original... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene23495.t1 | Aspi01Gene23495 | ER tubulae formation factor *(RHD3/RL) & original... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g37183 | No alias | ER tubulae formation factor *(RHD3/RL) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.05G037600.1 | Ceric.05G037600 | ER tubulae formation factor *(RHD3/RL) & original... | 0.08 | OrthoFinder output from all 47 species | |
GSVIVT01016855001 | No alias | Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g39310.1 | RHD3, LOC_Os01g39310 | ER tubulae formation factor (RHD3/RL) | 0.03 | OrthoFinder output from all 47 species | |
Len_g08736 | No alias | ER tubulae formation factor *(RHD3/RL) & original... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g04180 | No alias | ER tubulae formation factor *(RHD3/RL) & original... | 0.04 | OrthoFinder output from all 47 species | |
MA_10428984g0020 | RHD3 | ER tubulae formation factor (RHD3/RL) | 0.04 | OrthoFinder output from all 47 species | |
Ore_g26149 | RHD3 | ER tubulae formation factor *(RHD3/RL) & original... | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g121590.3.1 | RHD3, Solyc03g121590 | ER tubulae formation factor (RHD3/RL) | 0.04 | OrthoFinder output from all 47 species | |
Spa_g05226 | No alias | ER tubulae formation factor *(RHD3/RL) & original... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e020502_P002 | RHD3, Zm00001e020502 | ER tubulae formation factor (RHD3/RL) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e027781_P001 | RHD3, Zm00001e027781 | ER tubulae formation factor (RHD3/RL) | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000159 | protein phosphatase type 2A complex | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0005509 | calcium ion binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006606 | protein import into nucleus | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
BP | GO:0007165 | signal transduction | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
MF | GO:0019208 | phosphatase regulator activity | IEP | HCCA |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | HCCA |
MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
BP | GO:0034504 | protein localization to nucleus | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0051169 | nuclear transport | IEP | HCCA |
BP | GO:0051170 | import into nucleus | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
MF | GO:0061608 | nuclear import signal receptor activity | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
MF | GO:0140104 | molecular carrier activity | IEP | HCCA |
MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
CC | GO:1903293 | phosphatase complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR008803 | RHD3/Sey1 | 14 | 174 |
No external refs found! |