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Aliases : RPT3, NPH3, JK218
Description : Root phototropism protein 3 OS=Arabidopsis thaliana (sp|q9fmf5|rpt3_arath : 224.0)
Gene families : OG0000449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000449_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00038p00155420 | RPT3, NPH3,... | Root phototropism protein 3 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00061p00175030 | evm_27.TU.AmTr_v1... | BTB/POZ domain-containing protein At5g47800... | 0.03 | OrthoFinder output from all 47 species | |
| AT2G14820 | NPY2 | Phototropic-responsive NPH3 family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G31820 | MAB4, NPY1, ENP | Phototropic-responsive NPH3 family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT5G64330 | RPT3, NPH3, JK218 | Phototropic-responsive NPH3 family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g007915 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g123486 | MAB4, NPY1, ENP | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g15911 | RPT3, NPH3, JK218 | substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g05273 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g33236 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene08949.t1 | Aspi01Gene08949 | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene09339.t1 | RPT3, NPH3,... | substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0033.g025021 | No alias | substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0116.g046412 | No alias | not classified & original description: CDS=1316-3601 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.11G059700.1 | Ceric.11G059700 | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.32G010700.1 | Ceric.32G010700 | not classified & original description: pacid=50597870... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g32917 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g31714 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01012508001 | RPT3, NPH3, JK218 | Root phototropism protein 3 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01016261001 | No alias | BTB/POZ domain-containing protein At5g03250... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g38120.1 | LOC_Os02g38120 | BTB/POZ domain-containing protein At1g67900... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g10800.2 | NPY2, LOC_Os03g10800 | BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g01351 | RPT3, NPH3, JK218 | substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g16088 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| MA_135496g0010 | RPT3, NPH3, JK218 | Root phototropism protein 3 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| MA_52004g0010 | RPT3, NPH3, JK218 | component NPH3 of CUL3-BTB E3 ubiquitin ligase complex | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g01322 | RPT3, NPH3, JK218 | substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g04882 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g10911 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0003.g001683 | No alias | not classified & original description: CDS=1-1248 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g39393 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Smo93693 | RPT3, NPH3, JK218 | Root phototropism protein 3 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| Solyc01g098820.3.1 | RPT3, NPH3,... | Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc10g047530.2.1 | RPT3, NPH3,... | component NPH3 of CUL3-BTB E3 ubiquitin ligase complex | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e003063_P004 | NPY2, Zm00001e003063 | BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e014883_P001 | RPT3, NPH3,... | component NPH3 of CUL3-BTB E3 ubiquitin ligase complex | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | HCCA |
| MF | GO:0004144 | diacylglycerol O-acyltransferase activity | IEP | HCCA |
| BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
| BP | GO:0006952 | defense response | IEP | HCCA |
| MF | GO:0008374 | O-acyltransferase activity | IEP | HCCA |
| BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| MF | GO:0016411 | acylglycerol O-acyltransferase activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| BP | GO:0045017 | glycerolipid biosynthetic process | IEP | HCCA |
| MF | GO:0045735 | nutrient reservoir activity | IEP | HCCA |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |