1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_40918

Gb_40918 (FdC2)


Aliases : FdC2

Description : Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana (sp|o23344|fdc1_arath : 154.0)


Gene families : OG0007333 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007333_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40918
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AT4G14890 FdC2 2Fe-2S ferredoxin-like superfamily protein 0.06 OrthoFinder output from all 47 species
Cre07.g334800 FdC2 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g37722 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Ehy_g10832 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01017981001 FdC2 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os03g45710.1 FdC2, LOC_Os03g45710 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_184421g0010 FdC2 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp5g15920.1 FdC2 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g45396 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Pir_g06415 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Zm00001e005218_P001 FdC2, Zm00001e005218 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001041 2Fe-2S_ferredoxin-type 98 170
No external refs found!