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  5. Gb_40684

Gb_40684 (LBD11)


Aliases : LBD11

Description : transcription factor (AS2/LOB)


Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40684
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00187850 LBD2,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 OrthoFinder output from all 47 species
AMTR_s00076p00127530 LBD4,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
AMTR_s00080p00153120 LBD1,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
AT1G06280 LBD2 LOB domain-containing protein 2 0.02 OrthoFinder output from all 47 species
AT1G07900 LBD1 LOB domain-containing protein 1 0.04 OrthoFinder output from all 47 species
AT1G16530 LBD3, ASL9 ASYMMETRIC LEAVES 2-like 9 0.04 OrthoFinder output from all 47 species
AT1G31320 LBD4 LOB domain-containing protein 4 0.03 OrthoFinder output from all 47 species
AT1G65620 AS2 Lateral organ boundaries (LOB) domain family protein 0.03 OrthoFinder output from all 47 species
AT2G28500 LBD11 LOB domain-containing protein 11 0.04 OrthoFinder output from all 47 species
AT2G40470 LBD15, ASL11 LOB domain-containing protein 15 0.04 OrthoFinder output from all 47 species
AT2G42440 No alias Lateral organ boundaries (LOB) domain family protein 0.03 OrthoFinder output from all 47 species
AT3G03760 LBD20 LOB domain-containing protein 20 0.02 OrthoFinder output from all 47 species
AT4G00220 LBD30, JLO Lateral organ boundaries (LOB) domain family protein 0.03 OrthoFinder output from all 47 species
AT5G63090 LOB Lateral organ boundaries (LOB) domain family protein 0.03 OrthoFinder output from all 47 species
Adi_g113714 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g00715 LBD4 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g44730 AS2 AS2/LOB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g48421 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09772 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68836 LBD20 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12790.t1 LBD4, Aspi01Gene12790 AS2/LOB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene29461.t1 LOB, Aspi01Gene29461 AS2/LOB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene41937.t1 AS2, Aspi01Gene41937 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43012.t1 AS2, Aspi01Gene43012 AS2/LOB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene52657.t1 LBD15, ASL11,... AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65362.t1 AS2, Aspi01Gene65362 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0020.g015420 AS2 AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037915 LBD20 AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g42517 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G090000.1 LBD20, Ceric.14G090000 AS2/LOB-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.20G046600.1 Ceric.20G046600 not classified & original description: pacid=50566224... 0.03 OrthoFinder output from all 47 species
Dcu_g32484 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46319 LBD20 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003546001 LBD10 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
GSVIVT01004323001 ASL1, LBD36 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
GSVIVT01007677001 LOB RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
GSVIVT01013631001 LBD4 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 OrthoFinder output from all 47 species
GSVIVT01016330001 LBD11 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 OrthoFinder output from all 47 species
GSVIVT01016333001 LBD11 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
GSVIVT01024662001 LBD12, ASL5, PCK1 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 OrthoFinder output from all 47 species
GSVIVT01027620001 LBD19 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 OrthoFinder output from all 47 species
GSVIVT01028294001 LBD29, ASL16 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 OrthoFinder output from all 47 species
GSVIVT01032714001 LBD15, ASL11 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.07 OrthoFinder output from all 47 species
GSVIVT01032752001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
Gb_10524 LBD15, ASL11 transcription factor (AS2/LOB) 0.06 OrthoFinder output from all 47 species
Gb_11325 LBD4 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Gb_16914 LBD1 transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
Gb_16918 LBD11 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Gb_19390 LBD4 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Gb_20676 LBD1 transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
Gb_22180 LBD11 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Gb_38978 LBD15, ASL11 transcription factor (AS2/LOB) 0.08 OrthoFinder output from all 47 species
Gb_40767 LBD15, ASL11 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
LOC_Os03g05500.1 LBD29, ASL16,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
LOC_Os10g07510.1 LBD18, LOC_Os10g07510 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Lfl_g08340 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430986g0010 LBD15, ASL11 transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
MA_10430986g0020 LBD15, ASL11 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
MA_10434193g0010 LBD1 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
MA_126761g0010 LBD20 transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
MA_16891g0010 LOB transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
MA_170661g0010 LBD1 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
MA_292200g0010 LBD11 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
MA_41152g0010 LBD4 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
MA_61242g0010 LBD25 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
MA_66501g0010 LBD12, ASL5, PCK1 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
MA_88659g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp8g11560.1 LBD20 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Msp_g44204 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g42314 LBD4 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0186.g025054 LBD20 AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc01g091420.2.1 LBD18, Solyc01g091420 transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
Solyc02g086480.1.1 LOB, Solyc02g086480 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Solyc03g095940.1.1 LBD21, Solyc03g095940 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Solyc06g005090.3.1 LBD11, Solyc06g005090 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Solyc06g050950.3.1 LBD12, ASL5,... transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Solyc06g082770.3.1 LBD12, ASL5,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Solyc06g083930.2.1 LBD16, ASL18,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Solyc12g010810.1.1 LBD2, Solyc12g010810 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Spa_g29522 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001031_P001 LBD18, Zm00001e001031 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e019686_P001 LBD20, Zm00001e019686 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Zm00001e028582_P007 AS2, Zm00001e028582 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Zm00001e038429_P001 LBD11, Zm00001e038429 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e038582_P001 LBD18, Zm00001e038582 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 12 111
No external refs found!