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  5. Gb_39928

Gb_39928


Description : Protein HOTHEAD OS=Arabidopsis thaliana (sp|q9s746|hth_arath : 434.0)


Gene families : OG0000755 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000755_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39928

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00263600 evm_27.TU.AmTr_v1... (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00069p00163110 evm_27.TU.AmTr_v1... Protein HOTHEAD OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT1G12570 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 OrthoFinder output from all 47 species
AT1G72970 EDA17, HTH Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 OrthoFinder output from all 47 species
AT1G73050 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 OrthoFinder output from all 47 species
AT3G56060 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.04 OrthoFinder output from all 47 species
AT5G51930 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 OrthoFinder output from all 47 species
AT5G51950 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.05 OrthoFinder output from all 47 species
Aop_g70207 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s1527.g104149 No alias not classified & original description: CDS=163-1728 0.03 OrthoFinder output from all 47 species
Azfi_s2046.g108872 No alias not classified & original description: CDS=162-1706 0.03 OrthoFinder output from all 47 species
Ceric.10G018600.1 Ceric.10G018600 not classified & original description: pacid=50613331... 0.04 OrthoFinder output from all 47 species
Dcu_g44207 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28809 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
GSVIVT01010648001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01010650001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01019871001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_00812 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_00922 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_27931 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_28422 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_29960 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Gb_31766 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_32365 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_38452 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_39926 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_39927 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_41784 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g45530.1 LOC_Os02g45530 Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g02700.1 LOC_Os03g02700 Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g48400.1 LOC_Os04g48400 Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os08g31030.1 EDA17, HTH,... omega-hydroxy fatty acyl dehydrogenase 0.03 OrthoFinder output from all 47 species
LOC_Os09g19930.1 EDA17, HTH,... omega-hydroxy fatty acyl dehydrogenase 0.04 OrthoFinder output from all 47 species
Len_g09532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59481 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g23755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10041123g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_101600g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10307468g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10432967g0010 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_10433135g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10433135g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10434331g0010 EDA17, HTH Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_115358g0010 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_7181516g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g43877 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16242 EDA17, HTH not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo108291 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo112603 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo153538 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo235799 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Smo405960 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Smo407760 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo422534 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo427468 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Smo429523 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
Smo80819 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo90809 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc08g080190.4.1 Solyc08g080190 Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g05899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002156_P001 Zm00001e002156 Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e004200_P002 EDA17, HTH,... omega-hydroxy fatty acyl dehydrogenase 0.04 OrthoFinder output from all 47 species
Zm00001e015434_P001 Zm00001e015434 Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e030422_P001 Zm00001e030422 (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e033949_P001 EDA17, HTH,... omega-hydroxy fatty acyl dehydrogenase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007867 GMC_OxRtase_C 371 513
IPR000172 GMC_OxRdtase_N 27 307
No external refs found!