1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_39619

Gb_39619 (TPS02)


Aliases : TPS02

Description : mono-/sesquiterpene-/diterpene synthase


Gene families : OG0000661 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000661_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39619

Target Alias Description ECC score Gene Family Method Actions
Dcu_g08902 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01001155001 CPS, ATCPS1,... Phytohormones.gibberellin.synthesis.ent-copalyl... 0.06 OrthoFinder output from all 47 species
Gb_02388 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase. ent-copalyl... 0.01 OrthoFinder output from all 47 species
Gb_10531 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.01 OrthoFinder output from all 47 species
Gb_38468 No alias Monofunctional pimaradiene synthase OS=Pinus banksiana... 0.03 OrthoFinder output from all 47 species
Gb_38471 KS, KS1, ATKS1, ATKS, GA2 Alpha-bisabolene synthase OS=Abies grandis... 0.01 OrthoFinder output from all 47 species
Gb_38829 TPS02 mono-/sesquiterpene-/diterpene synthase 0.01 OrthoFinder output from all 47 species
LOC_Os11g28530.2 KS, KS1, ATKS1,... ent-kaurene synthase 0.01 OrthoFinder output from all 47 species
LOC_Os12g30824.1 KS, KS1, ATKS1,... ent-kaurene synthase 0.11 OrthoFinder output from all 47 species
Lfl_g30809 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433916g0010 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
MA_86213g0010 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase. ent-copalyl... 0.02 OrthoFinder output from all 47 species
Msp_g33503 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 95 220
IPR001906 Terpene_synth_N 1 52
No external refs found!