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  5. Gb_39068

Gb_39068 (RCD3, CDI3, SLAC1, OZS1)


Aliases : RCD3, CDI3, SLAC1, OZS1

Description : anion channel (SLAC)


Gene families : OG0000650 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000650_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39068
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT1G12480 RCD3, CDI3, SLAC1, OZS1 C4-dicarboxylate transporter/malic acid transport protein 0.02 OrthoFinder output from all 47 species
AT4G27970 SLAH2 SLAC1 homologue 2 0.04 OrthoFinder output from all 47 species
Aob_g34210 SLAH3 anion channel *(SLAC) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0107.g045141 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: CDS=407-2764 0.04 OrthoFinder output from all 47 species
MA_301724g0010 SLAH3 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
Msp_g14267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24130 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g007770.3.1 SLAH3, Solyc03g007770 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
Solyc03g031590.4.1 SLAH1, Solyc03g031590 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
Solyc06g036440.2.1 SLAH3, Solyc06g036440 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
Zm00001e016340_P001 SLAH1, Zm00001e016340 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
Zm00001e020426_P001 SLAH3, Zm00001e020426 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
Zm00001e027903_P001 SLAH2, Zm00001e027903 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
InterPro domains Description Start Stop
IPR004695 SLAC1/Mae1/Ssu1/TehA 37 218
IPR004695 SLAC1/Mae1/Ssu1/TehA 221 277
No external refs found!