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  5. Gb_38954

Gb_38954


Description : metabolite transporter (DTX)


Gene families : OG0000115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000115_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_38954
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00187420 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.02 OrthoFinder output from all 47 species
AT1G12950 RSH2 root hair specific 2 0.03 OrthoFinder output from all 47 species
Adi_g075158 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01147.t1 Aspi01Gene01147 metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14778 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g42830.1 LOC_Os03g42830 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
MA_10429202g0010 No alias metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
MA_14711g0010 No alias metabolite transporter (DTX) 0.05 OrthoFinder output from all 47 species
MA_433264g0010 No alias metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
MA_4390g0010 No alias metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Nbi_g30630 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g074840.3.1 Solyc04g074840 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Zm00001e004871_P001 Zm00001e004871 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0042910 xenobiotic transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003852 2-isopropylmalate synthase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006551 leucine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0009098 leucine biosynthetic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002528 MATE_fam 61 157
No external refs found!