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  5. Gb_38709

Gb_38709


Description : Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 OS=Arabidopsis thaliana (sp|q94k49|alp1_arath : 151.0)


Gene families : OG0000284 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000284_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_38709
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Ala_g21380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01196 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_03722 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_05153 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_05676 No alias Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.01 OrthoFinder output from all 47 species
Gb_10033 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Gb_10530 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Gb_13002 No alias Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.05 OrthoFinder output from all 47 species
Gb_15856 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_19878 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_23339 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Gb_24969 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Gb_26925 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_27420 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Gb_27975 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_28057 No alias Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.05 OrthoFinder output from all 47 species
Gb_28925 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Gb_31798 No alias Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.06 OrthoFinder output from all 47 species
Gb_32519 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_41474 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Ore_g43390 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 88 214
No external refs found!