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  5. Gb_38481

Gb_38481 (EMB2729, BE1)


Aliases : EMB2729, BE1

Description : starch branching enzyme


Gene families : OG0001102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001102_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_38481

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00224220 EMB2729, BE1,... Carbohydrate metabolism.starch... 0.05 OrthoFinder output from all 47 species
AT3G20440 EMB2729, BE1 Alpha amylase family protein 0.04 OrthoFinder output from all 47 species
Als_g14440 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23514 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05750 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0018.g014955 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: CDS=48-2924 0.04 OrthoFinder output from all 47 species
Cba_g01260 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18095 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07721 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04438 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037695001 EMB2729, BE1 Carbohydrate metabolism.starch... 0.04 OrthoFinder output from all 47 species
Len_g13716 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g04199 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18393 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g21170.1 EMB2729, BE1 starch branching enzyme 0.03 OrthoFinder output from all 47 species
Ore_g44500 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03209 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g48559 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16543 No alias EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19444 No alias starch branching enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027838_P001 EMB2729, BE1,... starch branching enzyme 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 447 538
IPR004193 Glyco_hydro_13_N 147 221
IPR006048 A-amylase/branching_C 824 914
No external refs found!