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  5. Gb_38438

Gb_38438


Description : Ricin B-like lectin R40G2 OS=Oryza sativa subsp. japonica (sp|q6z4n6|40g2_orysj : 223.0)


Gene families : OG0000410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000410_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_38438
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Als_g45704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36366.t1 Aspi01Gene36366 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g08133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G108700.1 Ceric.04G108700 not classified & original description: pacid=50630696... 0.05 OrthoFinder output from all 47 species
Ceric.1Z112300.1 Ceric.1Z112300 not classified & original description: pacid=50583677... 0.04 OrthoFinder output from all 47 species
Lfl_g25403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_228579g0010 No alias Ricin B-like lectin R40G3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Mp4g11980.1 No alias Ricin B-like lectin R40G2 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Ppi_g13184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0043531 ADP binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!