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  5. Gb_38428

Gb_38428


Description : no hits & (original description: none)


Gene families : OG0005374 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005374_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_38428
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00148710 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00071p00156280 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00071p00157560 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01004832001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01004836001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01013815001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01013894001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01024502001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os01g58650.1 LOC_Os01g58650 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8765487g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_922597g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g04730.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Smo412273 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo421626 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo432314 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo445118 No alias No description available 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!