1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_38178

Gb_38178


Description : component TWD40 of TPLATE AP-2 co-adaptor complex


Gene families : OG0005180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005180_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_38178

Target Alias Description ECC score Gene Family Method Actions
AT5G24710 No alias Transducin/WD40 repeat-like superfamily protein 0.15 OrthoFinder output from all 47 species
Adi_g055941 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
Adi_g102290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02602 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
Ala_g04924 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
Als_g28919 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.07 OrthoFinder output from all 47 species
Aop_g31280 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene63835.t1 Aspi01Gene63835 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0002.g001553 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
Cba_g02738 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Ceric.33G065100.1 Ceric.33G065100 component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
Cre12.g535350 No alias No description available 0.03 OrthoFinder output from all 47 species
Dcu_g06508 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.15 OrthoFinder output from all 47 species
Ehy_g07131 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01029823001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.1 OrthoFinder output from all 47 species
LOC_Os01g46510.1 LOC_Os01g46510 component TWD40 of TPLATE AP-2 co-adaptor complex 0.18 OrthoFinder output from all 47 species
Lfl_g07125 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.1 OrthoFinder output from all 47 species
MA_10432673g0010 No alias component TWD40 of TPLATE AP-2 co-adaptor complex 0.06 OrthoFinder output from all 47 species
MA_10437103g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_17944g0030 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g04690.1 No alias component TWD40 of TPLATE AP-2 co-adaptor complex 0.11 OrthoFinder output from all 47 species
Msp_g15509 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Nbi_g20127 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.07 OrthoFinder output from all 47 species
Pir_g04477 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Sam_g16152 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Smo92496 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.07 OrthoFinder output from all 47 species
Solyc01g102510.4.1 Solyc01g102510 component TWD40 of TPLATE AP-2 co-adaptor complex 0.04 OrthoFinder output from all 47 species
Zm00001e020289_P001 Zm00001e020289 component TWD40 of TPLATE AP-2 co-adaptor complex 0.13 OrthoFinder output from all 47 species
Zm00001e027982_P002 Zm00001e027982 component TWD40 of TPLATE AP-2 co-adaptor complex 0.17 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 202 243
No external refs found!