1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_38049

Gb_38049


Description : Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana (sp|q9scp4|pp279_arath : 401.0)


Gene families : OG0002119 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_38049
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AT3G06430 EMB2750 Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
MA_12518g0010 EMB2453, ATPPR5 Pentatricopeptide repeat-containing protein PPR5... 0.05 OrthoFinder output from all 47 species
Ore_g16720 EMB2453, ATPPR5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g098990.2.1 EMB2750, Solyc12g098990 Pentatricopeptide repeat-containing protein At3g06430,... 0.03 OrthoFinder output from all 47 species
Zm00001e023883_P001 EMB2453, ATPPR5,... Pentatricopeptide repeat-containing protein PPR5,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 71 93
IPR002885 Pentatricopeptide_repeat 234 265
IPR002885 Pentatricopeptide_repeat 274 321
IPR002885 Pentatricopeptide_repeat 166 214
IPR002885 Pentatricopeptide_repeat 342 390
IPR002885 Pentatricopeptide_repeat 95 143
No external refs found!