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  5. Gb_37606

Gb_37606


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 144.0)


Gene families : OG0000009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_37606
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Adi_g005807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g014659 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g021160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g024676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g028378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g029938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g041199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g044750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g046450 ORF120 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g047497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g050077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061737 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066979 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g070583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g076276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g077653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g084008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g107407 ORF145A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115431 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g129783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13859 ORF120 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g24368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g24631 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25317 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g26449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g30379 ORF120 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33605 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33849 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g34212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g35132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g35133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g35523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g35569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g35586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g35825 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39470 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g39756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g41008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43085 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g44106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46334 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g47180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47984 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g34147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04064 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31873 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene03042.t1 ORF120, Aspi01Gene03042 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene03854.t1 Aspi01Gene03854 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04516.t1 Aspi01Gene04516 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10667.t1 ORF120, Aspi01Gene10667 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11524.t1 ORF120, Aspi01Gene11524 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12479.t1 Aspi01Gene12479 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene13942.t1 Aspi01Gene13942 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17595.t1 Aspi01Gene17595 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20450.t1 Aspi01Gene20450 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23104.t1 ORF120, Aspi01Gene23104 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25053.t1 Aspi01Gene25053 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28291.t1 Aspi01Gene28291 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34505.t1 Aspi01Gene34505 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene38380.t1 Aspi01Gene38380 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene39236.t1 Aspi01Gene39236 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene39912.t1 Aspi01Gene39912 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44292.t1 Aspi01Gene44292 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47482.t1 Aspi01Gene47482 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70962.t1 Aspi01Gene70962 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20016 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g38228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35994 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40272 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g51742 ORF120 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23794 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23876 ORF120 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25018 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27024 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29078 ORF120 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g32384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_00288 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_05294 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_05523 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_08095 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_08105 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_25995 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_26132 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_27233 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_28242 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_28316 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.03 OrthoFinder output from all 47 species
Gb_30240 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_30317 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_30542 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_33583 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_38136 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_40566 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_41335 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Lfl_g01655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12768 ORF145A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19643 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g61927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c16_770V3.1 Pp3c16_770 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c24_5020V3.1 Pp3c24_5020 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c25_11001V3.1 Pp3c25_11001 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c4_23690V3.1 Pp3c4_23690 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c8_9221V3.1 Pp3c8_9221 No annotation 0.01 OrthoFinder output from all 47 species
Spa_g09460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52228 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 116 217
IPR025724 GAG-pre-integrase_dom 50 102
No external refs found!