Heatmap: Cluster_76 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Ovule	Ovule, mature	Ovule, pollinated	Strobilus, female	Ovulate strobilus	Microstrobilus	Kernel	Leaf	Leaf, female	Leaf, male	Leaf, salicylic acid	Leaf, seedling	Leaf, truncation control	Leaf, truncation treatment	Leaf, water	Yellow-green stripe leaves	Green leaves	Stem	Cambium	Root
Gb_00283 (DFL1)	-	-	-	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-
Gb_00575 (AAH)	-5.27	-	-	-1.93	-4.99	-17.24	1.59	4.03	-3.61	-8.64	-7.02	-21.18	-8.16	-19.32	-3.76	-4.23	-	-5.17	-4.3	-10.2
Gb_00794 (La1)	0.91	-	0.84	1.47	1.27	-1.33	-0.4	-1.07	-3.47	-2.32	-0.29	-1.84	-0.82	-1.0	-1.96	-1.38	-1.45	-1.85	0.68	2.06
Gb_00807	-1.92	-	-21.14	-19.26	-20.0	3.95	1.42	-1.45	-2.57	-1.84	-	-2.01	-	-2.54	-	-	-	-	-21.96	-1.29
Gb_02220	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_02360	-	-	-	3.44	1.74	2.08	-	-1.02	-	-	-	-	-	-	-	-	-	-	0.13	-
Gb_03246	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_03311	0.64	-	-1.87	3.11	-	-	-	-0.74	-4.84	-	-	-	1.74	0.9	-	-1.97	-	-	-1.39	1.6
Gb_03817	-	-	1.56	2.12	1.54	-	-	-0.99	-	-	-	-	-0.92	-	-	1.71	-	-	-	2.45
Gb_04542	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_04691	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_05967	3.7	-	-	-	-	-	-	-	2.8	-	-	-	-	-	-	-	-	-	-	-
Gb_06332	1.14	-	-	2.52	-	-	-	-0.32	0.06	-	-	-	-	-	-	2.85	-	-	-	1.6
Gb_06633	-1.09	-	-	-	-	-	2.46	-0.41	1.65	1.41	-0.16	-1.0	-1.51	-0.01	-	-	1.96	-	-	-0.21
Gb_07169	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_07236	1.44	0.67	2.06	-	1.11	-	-1.39	-3.12	-2.58	-	-	-	-	-	-1.52	-	-	0.25	0.57	2.51
Gb_07252	-	-	-	-	-	-	-	-	-	-	-	-	-	2.84	-	-	-	-	3.68	-
Gb_07808	3.27	-	-	-	-	-	-	1.09	-	-	-	1.72	-	-	-	-	-	-	-	2.31
Gb_07973	-	-	-	-	-	-	-	0.21	-	-	-	-	-	-	-	-	-	-	-	4.24
Gb_07996 (BUB3.2)	0.93	-	-	2.29	-	-	-	-0.62	-1.12	-	-0.45	-	-0.66	-	-0.64	2.47	1.55	-	0.67	-
Gb_08286	-	-	-	-	-	-	-	1.94	2.29	-	-	-	2.59	-	-	-	-	-	2.39	-
Gb_08817 (DFL1)	-	-	2.93	3.15	-	-	-	-0.89	-	-	-	-	-0.31	-	-	-	-	1.12	-	-
Gb_09707	1.73	-	-	-	-	-	2.42	-	-	-	-	-	-	-	-	-	-	-	-	3.5
Gb_09708 (JRG21)	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_10282	-	-	-	-	-	-	-	2.22	0.13	-	-	-	-	-	-	-	-	-	3.83	-
Gb_10325	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_10544 (SOS6)	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_10943 (HMG1)	-	-	-	-	-	-	2.31	-4.1	-0.57	-	-	-	-	-	-	-	-	-	3.84	-
Gb_10966 (EXO)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_11235 (MPK4)	-0.47	1.25	-1.5	1.21	-0.34	-	-2.12	0.41	-2.1	-1.33	0.77	-1.28	-0.76	-	0.67	1.73	-0.18	-1.54	0.58	-0.13
Gb_11271	2.52	-	3.29	-	-	-	-	-0.39	-	-	-	0.8	-	-	0.99	-	-	-	-	-
Gb_11452	1.33	-	1.63	-	-	-0.32	1.03	-2.77	-	-	-	-	-	-	-	-	-	-	-	3.51
Gb_11749	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_11844	2.57	-	-	-	-	-	-	3.67	-	-	-	-	-	-	-	-	-	-	0.47	-
Gb_12291	0.71	-	-	1.26	-0.94	-	0.63	-0.35	-0.2	-0.52	0.48	-0.58	-3.36	-1.89	1.74	-0.74	0.38	0.66	0.44	-0.11
Gb_12378 (ALDH22A1)	-	-	-	-	-	-	1.94	-0.54	-	-	-	-	1.62	-	2.56	-	-	-	-	2.7
Gb_13041	-0.77	-1.46	-1.63	-0.92	-1.04	-2.29	0.31	0.13	1.7	1.15	-0.1	1.26	-0.42	0.26	0.69	0.16	0.05	-1.67	-4.1	-1.79
Gb_13331	-	-	-	-	-	-	-	-	-	-	3.82	-	-	-	-	2.57	-	-	-	-
Gb_14047	-	-	-	-	-	-	2.26	1.74	3.53	-	-	-	-	-	-	-	-	-	-1.77	-
Gb_15299 (HAB1)	-	-	-	-	3.47	-	-	-0.86	-	-	-	-	-	-	-	3.07	-	-	-	-
Gb_15856	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_16230	-	2.19	-	3.2	-	-	-	-1.9	-0.72	-	-	-1.89	-0.26	-	-0.59	-1.87	-0.01	-	1.23	-
Gb_16399	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_16706	-	-	-	-	-	-	3.24	-	-	-	-	-	-	-	-	-	-	-	3.4	-
Gb_16782 (RCE1)	-	-	-	-	-	-	4.15	1.19	-	-	-	-	-	-	-	-	-	-	-	-
Gb_17055 (NRP2)	-	-	-	4.31	-	-	-	-2.56	-	-	-	-	-	-	-	-	-	-	-	-
Gb_17402	0.23	-	-	2.6	-	-5.54	-	-0.32	-	-	-	-	1.42	1.23	-	1.18	-	0.17	-0.35	1.46
Gb_17584	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_18367	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.32	-
Gb_18899 (CRK2)	-	-	-	-	-	-	-	1.57	-	-	-	-	-	-	-	-	-	-	-	4.09
Gb_19044	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_19216	2.12	-	1.5	2.21	0.66	0.7	-0.35	-1.6	-1.07	-	-	-1.39	-	-	-	-	-	-	0.86	0.25
Gb_19564	-	-	-	-	-	-	-	-	1.68	-	-	-	-	-	-	-	4.07	-	-	-
Gb_19737 (FKP1)	2.55	-	-	-	-	-	1.37	1.57	-	-	1.25	-1.09	1.08	-	1.33	-9.16	-9.54	-	0.17	-
Gb_19838	-	0.46	0.88	1.0	-0.61	-	-0.47	-0.21	-	0.07	-0.8	-	2.18	0.98	0.68	-0.41	-0.59	-	-0.2	-0.96
Gb_20028	-	-	-	-	-	-	-	-0.87	-	-	-	-	-	-	-	-	-	-	4.28	-
Gb_20560	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_21117 (GST25)	-	-	-	3.3	-	-	2.74	-0.54	-	-	1.49	-	-	-	-	-	-	-	-	-
Gb_21888	1.78	-	-	-	-	-	-0.59	1.26	-	1.37	-	-	-	-	-	-	-	-	0.96	3.16
Gb_21925 (HMG1)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_21997	2.63	-	-	-	-	-	-	2.83	-	2.74	-	-	-	-	-	-	-	-	-	-
Gb_22637	-0.06	-	0.26	-	-2.16	3.69	-1.06	-3.12	-4.72	-3.9	-	-2.17	-5.58	-2.78	-3.66	-	-	-0.01	-4.02	1.32
Gb_22874 (RLP48)	1.2	-	-0.67	-	-	-	-	-6.87	-3.36	-	-	-	-	-3.28	-	-	-	2.46	0.8	3.27
Gb_24372	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_24700 (HMG1)	1.12	1.89	-0.27	-	-0.11	-	2.21	-3.53	-	-	-0.37	-	-	-	-	-	-	-	2.78	-
Gb_24797 (CLA)	-	-	-	-	-	-	-	0.27	-	-	-	-	-	-	4.23	-	-	-	-	-
Gb_24966	-0.3	-	-0.9	0.44	0.51	-	2.49	0.13	-3.58	-2.71	-1.85	-	0.66	1.16	0.08	-1.52	-1.48	-0.03	0.89	-2.16
Gb_25109	1.57	-1.81	0.71	0.06	-0.3	-3.37	-1.73	-5.82	-	-5.11	-	-	-	-	-	-4.59	-	-0.65	3.27	1.32
Gb_25347 (XTR7)	-0.18	-	1.39	-	0.12	-	-	-2.35	-2.57	-	-2.11	-1.33	-	-	-0.56	-1.67	-	-0.11	0.32	3.49
Gb_25816	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_26064	3.45	-	-	-	-	-	-	3.18	-	-	-	-	-	-	-	-	-	-	-	-
Gb_26332 (PYL4)	-	-	-	0.07	-	1.94	2.55	-0.84	-2.46	-	-0.23	-2.63	-	-1.21	-	-	-	0.17	0.19	2.26
Gb_26954 (HSP70T-2)	-	-	-	-	-	-	-	0.64	-	-	4.2	-	-	-	-	-	-	-	-	-
Gb_27031	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_27403	0.61	-	-	-	-	-	-	0.75	-1.28	-	-	-	0.82	0.09	-	2.85	-	-	1.9	1.38
Gb_27434	-	-	-	-	-	-	-	1.69	-	-	-	-	-	-	-	-	-	-	4.07	-
Gb_27446	-	3.51	-	-	-	-	-	-1.85	-	-	2.25	-	-	-	-	-	-	-	1.83	-
Gb_27881 (UBC27)	-	-	-	-	-1.78	2.03	-0.26	-0.79	0.65	1.47	2.31	-2.25	-3.04	-1.28	1.12	-1.17	-	-	-3.48	0.54
Gb_28010	-	-	-	-	-	-	-	-0.95	-	-	4.28	-	-	-	-	-	-	-	-	-
Gb_28218	-0.08	-	1.14	1.89	-2.66	-1.62	-0.51	-0.43	-1.08	-2.63	0.59	-3.62	-2.04	-0.83	0.33	-0.53	-0.41	-1.36	1.88	0.5
Gb_28328	1.75	3.01	1.55	1.67	-1.52	-	-2.23	-1.13	-	-	-	-	-	-	-	-	-	0.53	-	-
Gb_28721 (ACS7)	-1.09	-	-	-	-	-	-	0.22	1.15	0.43	-1.0	-5.22	0.62	0.94	-0.2	-1.02	-1.99	1.36	-0.02	2.5
Gb_28848	2.55	-	-	-	-	3.28	1.3	-1.84	0.77	-	-	-	-	-	-	-	-	-	-	-
Gb_29763	-	-	1.88	-	-	-	-	0.89	1.31	2.11	1.84	-	0.55	-	-	-	-	-	1.39	-
Gb_30358 (NRPB3)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_30728	-	-	-	4.04	-	-	-	-0.04	-	-	1.35	-	-	-	-	-	-	-	-	-
Gb_30998	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_31539 (MSS1)	1.35	-	-	-	-0.03	2.18	-0.42	1.26	-1.51	-	-1.1	-0.64	-0.87	-1.88	-0.64	-0.79	-0.75	-0.66	-2.52	1.97
Gb_32179	-	-	-	-	-	-	-	-1.01	-	2.14	0.64	-	-	-	-	-	3.76	-	-23.96	-
Gb_32817 (CAP1)	-	-	-	3.99	-	-	-	-3.96	-	-	-	-	-	-	-	-	-	-	-	2.02
Gb_33025 (TPL)	0.77	-	-	-	-	0.13	-0.9	1.07	-0.36	-1.09	-	0.43	0.03	-0.71	-	0.43	0.23	1.24	2.03	0.46
Gb_33698	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_33799	3.12	-	-	3.48	-	-	-	-2.38	-	-	-	-	-	-	-	-	-	-	-	-
Gb_34189	-	-	1.76	2.94	-	-	-	-1.23	-	-	-	-	-	-	-	1.39	-	-	2.55	-
Gb_34970	1.16	1.49	0.34	0.15	1.61	-1.46	-0.77	0.11	-0.64	-2.48	-0.1	-2.04	0.35	0.03	-	-	-	-	-	1.68
Gb_35006	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_35098	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.32
Gb_35156 (ATJ)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_35551 (EXL2)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.32
Gb_35774 (UBQ11)	-0.28	-1.09	-0.9	0.4	0.45	0.99	1.74	-0.65	-0.01	-0.36	-0.87	-0.96	-4.07	-1.46	0.03	-0.66	0.3	-0.76	0.64	0.29
Gb_35903	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_37189	-	-	-	-	-	-	-	-1.15	-	-	0.3	-	-	0.86	2.44	0.61	2.16	1.14	1.52	-
Gb_37540	2.53	-	-	-	-	-	-	-	-	-	3.45	1.71	-	-	-	-	-	-	-	-
Gb_37606	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.32	-	-
Gb_37821	-1.96	-	-1.95	-	-	-0.49	1.42	-2.87	-3.99	-2.24	-	-	-	-	-	-1.4	-	-	-0.24	3.85
Gb_38277	-	-	-	-	-	-	-	-1.66	-	-	-	-	-	-	-	4.3	-	-	-	-
Gb_38373	-	-	-	-	-	-	-	-0.18	0.07	0.67	-	-	0.45	-1.09	1.25	-	-	-	3.48	0.14
Gb_38450 (UGT73C6)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_38469 (CYP71A22)	-	-	-	-	-	3.55	0.71	-2.34	-0.23	1.89	-	0.94	-	-	-	-	-	-	-	-
Gb_39170 (AMY1)	1.45	-	-0.05	-	-	1.36	0.83	1.16	-	-1.63	-	-	-10.2	-10.34	-	-	-	1.53	0.67	2.3
Gb_39319 (MRP14)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.32	-
Gb_39430	-	-	-	-	-	-	-	-0.12	-	-	-	-	-	-	2.97	3.49	-	-	-	-
Gb_39764	-	-	3.32	-	-	-	2.32	1.07	-	-	-	-	-	-	-	-	-	-	1.56	-
Gb_39912	0.36	-	-	2.04	-0.5	-	-0.43	-0.11	0.04	1.14	-0.7	-	-1.05	-0.16	-	1.74	-	-0.83	1.04	0.05
Gb_40052	0.67	-	-	-	-	-	-	-0.24	-	-	-	-	0.47	-	-	3.34	-	-	1.65	1.55
Gb_40812	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3.4	3.24	-	-	-
Gb_41144 (TOR2)	-	-	2.35	-	-	-	-	-1.8	-	-	-	-	-	0.95	-	-	3.67	-	-	-
Gb_41156 (PKS6)	-	-	-	-	-	-	-	0.23	0.9	-	-	-0.39	0.21	-	-	-	-	-	3.29	2.38

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.