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Gb_36347


Description : Pentatricopeptide repeat-containing protein At5g66631 OS=Arabidopsis thaliana (sp|b3h4p1|pp450_arath : 479.0)


Gene families : OG0001104 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001104_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36347
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AT2G01360 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 OrthoFinder output from all 47 species
Aev_g10282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14119 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09922 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019029001 No alias Pentatricopeptide repeat-containing protein At2g01390... 0.08 OrthoFinder output from all 47 species
GSVIVT01019040001 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.04 OrthoFinder output from all 47 species
Gb_11322 No alias Pentatricopeptide repeat-containing protein At2g01390... 0.05 OrthoFinder output from all 47 species
Len_g03366 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17138 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g05606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_89328g0010 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.06 OrthoFinder output from all 47 species
Pir_g09735 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g10079 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25243 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc02g065510.1.1 Solyc02g065510 Pentatricopeptide repeat-containing protein At5g66631... 0.04 OrthoFinder output from all 47 species
Tin_g11567 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g13511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 194 243
IPR002885 Pentatricopeptide_repeat 570 617
IPR002885 Pentatricopeptide_repeat 269 297
IPR002885 Pentatricopeptide_repeat 156 183
IPR002885 Pentatricopeptide_repeat 454 514
No external refs found!