1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_36242

Gb_36242 (AGD8)


Aliases : AGD8

Description : class II ARF-GAP ARF-GTPase-activating protein


Gene families : OG0001922 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001922_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36242

Target Alias Description ECC score Gene Family Method Actions
AT4G17890 AGD8 ARF-GAP domain 8 0.03 OrthoFinder output from all 47 species
Adi_g064067 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.05 OrthoFinder output from all 47 species
Aev_g42782 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.06 OrthoFinder output from all 47 species
Als_g00881 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.03 OrthoFinder output from all 47 species
Ceric.01G027900.1 AGD8, Ceric.01G027900 class II ARF-GAP ARF-GTPase-activating protein &... 0.03 OrthoFinder output from all 47 species
Dac_g14431 AGD9 class II ARF-GAP ARF-GTPase-activating protein &... 0.05 OrthoFinder output from all 47 species
Ehy_g11258 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.05 OrthoFinder output from all 47 species
LOC_Os03g63710.1 AGD8, LOC_Os03g63710 class II ARF-GAP ARF-GTPase-activating protein 0.07 OrthoFinder output from all 47 species
Len_g55685 AGD9 class II ARF-GAP ARF-GTPase-activating protein &... 0.04 OrthoFinder output from all 47 species
Lfl_g36558 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.05 OrthoFinder output from all 47 species
Mp8g08200.1 AGD8 class II ARF-GAP ARF-GTPase-activating protein 0.02 OrthoFinder output from all 47 species
Nbi_g29700 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.03 OrthoFinder output from all 47 species
Ppi_g31534 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.06 OrthoFinder output from all 47 species
Spa_g19347 AGD9 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g20397 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g39446 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e011636_P001 AGD9, Zm00001e011636 class II ARF-GAP ARF-GTPase-activating protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001164 ArfGAP_dom 12 113
No external refs found!