1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_35169

Gb_35169 (PHIP1)


Aliases : PHIP1

Description : no hits & (original description: none)


Gene families : OG0002968 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002968_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_35169

Target Alias Description ECC score Gene Family Method Actions
AT3G55340 PHIP1 phragmoplastin interacting protein 1 0.04 OrthoFinder output from all 47 species
Aop_g04300 PHIP1 phragmoplastin-interacting factor *(PHIP1) & original... 0.03 OrthoFinder output from all 47 species
Cre10.g466450 No alias No description available 0.04 OrthoFinder output from all 47 species
Ehy_g08940 No alias phragmoplastin-interacting factor *(PHIP1) & original... 0.02 OrthoFinder output from all 47 species
Mp3g24090.1 PHIP1 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.04 OrthoFinder output from all 47 species
Solyc06g018110.3.1 PHIP1, Solyc06g018110 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 408 425
IPR000504 RRM_dom 214 282
IPR000504 RRM_dom 313 380
No external refs found!