Gb_35015 (RAP2.12)

Aliases : RAP2.12

Description : transcription factor (ERF)

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_35015

Target	Alias	Description	ECC score	Gene Family Method
AT1G50640	ATERF3, ERF3	ethylene responsive element binding factor 3	0.1	OrthoFinder output from all 47 species
AT3G20310	ERF7, ATERF7, ATERF-7	ethylene response factor 7	0.03	OrthoFinder output from all 47 species
Aev_g00443	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene70904.t1	Aspi01Gene70904	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g02418	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.04	OrthoFinder output from all 47 species
Cba_g05027	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.04	OrthoFinder output from all 47 species
Cba_g69291	DEAR1, CEJ1, ATERF#011	subgroup ERF-II transcription factor *(ERF19/20) &...	0.02	OrthoFinder output from all 47 species
Ceric.15G043400.1	HRE2, Ceric.15G043400	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Ceric.15G043500.1	HRE2, Ceric.15G043500	transcription factor component *(HRE/RAP2.12) of...	0.04	OrthoFinder output from all 47 species
Ehy_g29769	No alias	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.04	OrthoFinder output from all 47 species
LOC_Os01g21120.1	HRE2, LOC_Os01g21120	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os08g36920.1	RRTF1, LOC_Os08g36920	transcription factor (ERF)	0.04	OrthoFinder output from all 47 species
Lfl_g25640	No alias	subgroup ERF-III transcription factor & original...	0.07	OrthoFinder output from all 47 species
Lfl_g34009	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
MA_26547g0010	CRF3	transcription factor (ERF)	0.04	OrthoFinder output from all 47 species
Nbi_g04002	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ore_g03958	TINY2	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pir_g58283	ERF110	subgroup ERF-X transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Ppi_g00637	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ppi_g30116	No alias	subgroup ERF-III transcription factor & original...	0.05	OrthoFinder output from all 47 species
Sam_g32611	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Solyc03g093560.1.1	Solyc03g093560	transcription factor (ERF)	0.05	OrthoFinder output from all 47 species
Solyc06g063070.3.1	RAP2.12, Solyc06g063070	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Spa_g04184	DEAR2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g22026	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Spa_g24188	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g08575	ORA47	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.04	OrthoFinder output from all 47 species
Zm00001e002151_P001	HRD, Zm00001e002151	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
Zm00001e021579_P001	ERF7, ATERF7,...	Pathogenesis-related genes transcriptional activator...	0.03	OrthoFinder output from all 47 species
Zm00001e026989_P001	ERF110, Zm00001e026989	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Zm00001e027351_P001	ATERF4, RAP2.5,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Zm00001e032033_P001	ATERF-9, ERF9,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Zm00001e041539_P001	ERF-1, ATERF-1,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	142	190

External Links

No external refs found!

Gb_35015 (RAP2.12)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation