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  5. Gb_34895

Gb_34895


Description : Pentatricopeptide repeat-containing protein At1g69290 OS=Arabidopsis thaliana (sp|p0c7r4|pp110_arath : 467.0)


Gene families : OG0001501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001501_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_34895
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00179800 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g17616... 0.02 OrthoFinder output from all 47 species
AMTR_s00002p00272000 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g03100,... 0.04 OrthoFinder output from all 47 species
AMTR_s00019p00220910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g03100,... 0.04 OrthoFinder output from all 47 species
AT1G03100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G68980 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G69290 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G17616 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g067157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G012400.1 Ceric.01G012400 not classified & original description: pacid=50592360... 0.06 OrthoFinder output from all 47 species
Ceric.01G123400.1 Ceric.01G123400 not classified & original description: pacid=50591208... 0.04 OrthoFinder output from all 47 species
Dcu_g04085 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_08062 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
MA_46631g0010 No alias Pentatricopeptide repeat-containing protein At1g69290... 0.05 OrthoFinder output from all 47 species
MA_743669g0010 No alias Pentatricopeptide repeat-containing protein At1g03100,... 0.09 OrthoFinder output from all 47 species
MA_90791g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Solyc01g088750.3.1 Solyc01g088750 Pentatricopeptide repeat-containing protein At1g69290... 0.08 OrthoFinder output from all 47 species
Solyc04g008410.3.1 Solyc04g008410 Pentatricopeptide repeat-containing protein At1g03100,... 0.04 OrthoFinder output from all 47 species
Spa_g32584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e019596_P001 Zm00001e019596 Pentatricopeptide repeat-containing protein At1g69290... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 546 589
IPR033443 PPR_long 406 507
No external refs found!