Gb_34884

Description : Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana (sp|q9lfc5|pp360_arath : 297.0)

Gene families : OG0002597 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002597_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_34884
Cluster	HCCA: Cluster_82

Target	Alias	Description	ECC score	Gene Family Method	Actions
GSVIVT01018339001	No alias	Putative pentatricopeptide repeat-containing protein...	0.03	OrthoFinder output from all 47 species
MA_774352g0010	No alias	Pentatricopeptide repeat-containing protein At4g26680,...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	352	381
IPR002885	Pentatricopeptide_repeat	531	579
IPR002885	Pentatricopeptide_repeat	239	277
IPR002885	Pentatricopeptide_repeat	425	474
IPR002885	Pentatricopeptide_repeat	165	191
IPR002885	Pentatricopeptide_repeat	395	422
IPR002885	Pentatricopeptide_repeat	304	328
IPR002885	Pentatricopeptide_repeat	499	528
IPR002885	Pentatricopeptide_repeat	204	226

External Links

No external refs found!