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  5. Gb_34701

Gb_34701


Description : gamma-aminobutyric acid transporter (GAT)


Gene families : OG0000375 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_34701
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Adi_g108691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117650 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Ala_g07945 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Als_g10671 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene31031.t1 Aspi01Gene31031 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.17G017900.1 Ceric.17G017900 gamma-aminobutyric acid transporter *(GAT) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g36639 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01034728001 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 217 436
IPR013057 AA_transpt_TM 456 649
No external refs found!