Heatmap: Cluster_4 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
Gb_00125 (TINY2)
- - - - -2.72 -1.87 - -3.06 - - -3.82 - - - -2.91 - - -1.87 3.99 1.64
Gb_00188 (HIPP20)
-4.96 -5.42 -2.71 -2.55 -2.9 -0.38 -0.0 -2.67 -5.62 -3.96 -6.68 -3.98 -6.75 -5.22 - -5.88 -6.08 -0.69 2.78 3.3
-1.13 -1.85 -2.76 - -0.9 -0.05 - -1.36 -2.45 -1.23 -0.79 -3.99 -2.06 -1.44 -0.73 -1.4 -1.89 -0.48 3.67 -0.58
-0.02 0.92 0.08 -0.04 0.31 -2.15 -2.22 -0.82 -0.54 -0.6 -0.06 -1.15 -0.5 -1.12 -0.1 -1.81 -1.89 -0.15 2.27 0.77
Gb_01202 (DHAR3)
-0.26 1.62 0.43 -0.43 0.24 -1.16 -2.1 -1.54 -2.42 -1.87 -3.47 -3.54 -5.59 -3.47 -2.12 -1.64 -1.54 0.69 1.74 2.38
-3.7 -2.52 -4.56 -2.94 -0.92 -0.77 -3.03 -1.26 -0.46 -0.27 -1.1 -1.46 -2.2 -1.64 -0.84 -1.77 -0.84 0.54 2.58 2.62
Gb_01718 (PGP4)
0.77 -1.49 -0.99 -0.57 0.08 -0.6 0.87 -0.52 -1.15 -0.63 -2.22 -1.67 -1.82 -2.95 -1.75 -2.32 -1.94 -1.42 1.92 2.48
-0.19 -3.98 -1.46 -1.92 -1.44 -0.57 -1.38 -1.31 -2.04 -2.03 -3.04 -1.39 -2.6 -2.38 -2.96 -3.72 -2.97 0.87 1.97 3.2
-1.36 -3.08 -2.69 -0.75 0.04 1.08 -3.76 -0.06 -1.11 -1.32 0.65 -0.71 -2.33 -1.97 0.73 0.07 -0.52 0.96 2.16 0.31
-1.08 -1.07 0.32 -0.53 -0.28 1.26 -0.67 -2.75 - - - -6.12 -8.01 - -6.51 -6.62 -7.0 1.83 1.83 2.57
-0.99 -0.67 -1.78 -3.83 -2.45 0.29 2.07 -4.23 -3.74 -2.74 - -4.41 -6.87 -7.0 -3.75 -4.83 -5.42 -1.05 2.07 2.95
Gb_04083 (MLO10)
1.19 1.08 0.92 -1.36 0.3 -1.23 -0.73 -0.44 0.26 0.38 -0.47 -2.36 -1.73 -2.09 -0.44 -0.74 -1.51 -0.18 1.27 0.49
1.35 -3.59 -3.66 -0.84 -0.39 -1.01 -3.8 0.61 -0.69 -0.85 -1.09 -0.92 -1.38 -0.92 -0.18 -1.74 -2.83 -0.91 2.08 2.24
-0.47 -4.42 -5.06 -0.18 0.1 -0.09 -3.73 0.2 -1.23 -1.09 -0.51 -1.16 0.8 1.06 0.03 -1.38 -2.21 -1.69 1.64 2.06
Gb_04673 (MAN6)
-4.14 -5.41 -3.01 -3.83 -3.2 -3.68 -2.11 -1.48 -8.55 -7.38 -4.89 -5.69 -5.54 -5.91 -3.79 -2.0 -0.71 0.68 3.02 3.03
Gb_04737 (HCT)
-1.71 -1.79 -2.67 -1.44 -3.15 -6.01 -1.11 -0.6 -8.92 - - - - - -8.15 -8.03 - 2.15 2.73 2.7
-1.61 -3.08 -3.31 -0.52 -1.24 -4.81 -1.49 -0.27 -4.72 -4.98 -8.55 -6.39 -5.96 -6.63 -6.84 -3.31 -4.94 2.73 1.79 2.76
-2.74 - -3.27 -1.64 -1.91 2.08 -0.99 -2.92 -3.36 -3.14 -1.03 -4.72 -3.93 -3.22 -1.51 -0.89 - -4.53 3.62 -2.98
-4.59 -4.65 -6.37 -5.8 -1.82 -3.49 -2.86 -1.19 -1.02 -1.16 -1.14 -2.95 -0.89 -0.85 -1.17 -3.23 -1.92 0.86 3.37 1.75
-0.52 -1.87 -7.39 -3.18 -0.48 0.62 -2.54 -0.38 -0.83 -1.9 -1.78 -3.63 -1.06 -0.66 -1.12 -1.28 -1.53 0.2 3.2 0.87
-1.66 -2.37 -2.48 -0.54 0.0 -0.69 -4.62 -0.66 -1.02 -0.88 -0.48 -0.97 -1.83 -2.03 -0.38 -0.49 -0.37 0.93 2.91 0.9
-2.85 - -4.87 -2.81 -0.76 0.12 0.6 -0.46 -0.22 0.36 -2.85 -1.23 -4.18 -4.55 -2.95 -0.56 -1.26 0.57 2.15 2.54
1.23 0.43 -0.38 0.67 0.94 -0.31 -1.41 -0.68 -1.47 -1.38 -0.61 -1.34 -1.96 -1.94 -0.65 -1.99 -1.79 -0.02 1.78 1.2
Gb_08355 (AOS)
-2.55 - -8.78 -3.51 -2.28 -3.24 -10.1 -3.11 -4.91 -4.34 -9.4 -6.04 -8.9 -7.72 -10.39 -5.91 -6.81 -0.21 2.45 3.69
-0.62 -4.54 -3.29 -0.65 1.51 -1.44 -4.24 -0.67 -0.98 -0.43 -2.02 -1.43 -0.14 -0.23 -1.61 -1.87 -1.64 -0.01 2.33 2.03
-0.85 -4.32 -5.73 -0.67 1.51 -0.99 -4.12 -0.65 -1.09 -0.71 -1.57 -1.24 -0.13 -0.44 -1.19 -2.73 -2.21 -0.12 2.83 1.26
-0.54 - -5.63 -0.28 1.8 -0.77 -3.16 -0.45 -1.15 -0.69 -1.35 -1.46 -0.83 -1.7 -1.18 -1.86 -2.94 0.1 2.83 0.88
Gb_09897 (MES17)
- - -5.07 -3.09 -2.09 -3.9 -5.28 -3.28 -9.07 -8.3 -7.59 -9.47 - - - - - 1.12 3.11 3.11
Gb_10430 (MEE7)
-2.17 -1.83 -3.21 -3.16 -1.1 -0.91 -0.04 -0.69 -1.8 -1.79 -1.07 -0.68 -2.17 -1.31 -0.97 -1.6 -1.46 1.08 1.97 2.84
Gb_10760 (APY2)
-2.94 -1.91 -2.79 -4.17 -1.8 -3.66 -1.14 -4.02 - - - - - -11.76 - - - -1.79 2.93 3.41
-0.88 0.71 -0.55 -0.25 -0.51 -0.82 0.19 -0.31 -0.35 -0.28 0.01 -1.71 -0.09 -0.63 0.1 -0.78 -1.28 -1.04 2.46 -0.96
-4.35 - - 0.62 -2.84 1.35 -1.04 -4.15 -3.0 - -0.54 - -4.68 - -1.24 - - -0.66 3.72 -3.64
-2.36 - - -0.24 -2.78 - -2.65 -1.38 -0.63 -0.95 -1.01 - 1.09 -0.62 -1.55 - - -2.11 3.31 1.75
-0.3 2.16 -0.78 0.57 0.82 -5.42 -5.77 -9.65 -10.25 -11.07 - -10.3 -17.07 -11.29 -14.7 -7.9 -14.91 -3.66 3.03 1.37
-1.9 -4.07 -2.34 -2.42 -0.28 -0.63 -1.74 -0.63 -1.55 -1.97 -1.26 -1.48 -0.89 -0.67 -0.88 -0.49 -0.39 0.16 2.99 1.71
-1.45 - -3.22 -1.38 -0.4 -1.12 -0.04 -0.44 -1.53 -1.09 -3.15 -1.95 -1.53 -1.75 -2.74 -0.46 0.25 0.84 2.99 1.35
Gb_12856 (ACA8)
-2.3 - -1.67 -0.49 -0.5 -2.23 -1.82 -2.53 -5.04 -3.11 -2.14 -5.07 -2.47 -4.0 -2.88 -5.01 - -0.26 3.85 0.43
Gb_12865 (ACA9)
-0.02 -1.12 0.11 0.31 0.4 -1.28 -1.53 -1.58 -2.35 -4.6 -2.73 -2.51 -2.88 -2.42 -2.24 -2.65 -3.05 0.55 3.37 -0.59
Gb_12866 (ACA8)
-0.18 -2.24 0.29 0.89 -0.12 -2.06 -1.78 -1.63 -2.67 -2.02 -4.34 -1.36 -3.32 -1.88 -1.58 -3.39 -2.9 0.1 3.42 -0.95
Gb_13076 (ITN1)
-3.91 - -6.0 - -6.15 -3.33 -4.44 -1.1 -1.11 -1.16 -2.01 -3.25 -0.64 -0.55 -1.47 -3.54 -1.57 -1.35 3.84 0.27
1.69 - - - 1.31 - - -0.95 -1.55 - 1.81 - - - 0.08 - - - 3.15 -
-0.39 - - - 1.72 - - -1.26 - - 0.54 -1.3 - -1.82 - -0.14 - 0.41 3.01 1.62
Gb_15786 (ORF240B)
-3.55 -2.66 -3.91 -1.66 -3.92 1.94 -1.95 -3.44 -3.37 -3.37 -3.09 -4.52 -4.57 -3.94 -2.75 -3.22 -3.62 -2.9 3.81 -2.85
Gb_16476 (Hsp70b)
- - - - - - - - - - - - - - - - - - 4.32 -
Gb_17198 (HB-4)
-2.0 -3.95 -3.43 -1.82 -1.47 -1.52 -2.6 -3.08 -6.68 - -5.21 -5.89 -5.5 -3.94 -4.3 -2.09 -1.6 0.61 3.4 2.45
Gb_17199 (HB-4)
-1.61 -1.07 -2.55 - -1.08 -0.33 -1.87 -2.83 -4.24 -4.04 - -3.86 - -4.04 - -0.73 -4.12 1.08 3.18 2.4
Gb_18240 (CNA)
-0.94 -0.86 -1.62 -0.72 -0.21 -1.68 -1.62 -0.31 -1.33 -1.47 -1.1 -1.7 0.34 -0.08 -1.54 -1.61 -2.36 0.4 2.88 1.25
Gb_18866 (MAN6)
-4.14 -5.41 -3.01 -3.83 -3.2 -3.68 -2.11 -1.48 -8.55 -7.38 -4.89 -5.69 -5.54 -5.91 -3.79 -2.0 -0.71 0.68 3.02 3.03
Gb_18867 (MAN6)
-4.14 -5.41 -3.01 -3.83 -3.2 -3.68 -2.11 -1.48 -8.55 -7.38 -4.89 -5.69 -5.54 -5.91 -3.79 -2.0 -0.71 0.68 3.02 3.03
-8.22 -7.42 -7.99 -3.7 -1.62 0.08 -9.79 -1.68 -1.86 -2.03 -3.46 -2.63 -7.67 -5.59 -3.19 -2.83 -3.55 0.87 2.92 2.94
Gb_19659 (IPMS1)
0.22 1.15 0.98 0.7 0.97 -1.32 1.44 -3.83 -5.19 -5.28 -3.99 -4.8 -4.88 -4.51 -3.92 -5.11 -5.88 -1.63 1.8 1.89
-7.05 - - -4.34 - -4.17 -3.73 -7.66 - - - - - - - - - -2.39 3.04 3.51
-0.9 -0.25 -0.61 -0.38 0.05 -0.5 -0.11 -0.58 -0.94 -0.97 -0.54 -0.98 -0.74 -0.85 -0.8 -1.37 -1.56 0.5 2.43 1.25
Gb_21066 (PEPR1)
-0.12 - -2.28 - -1.11 1.45 -1.65 -0.01 -1.46 -0.89 0.79 -2.15 -2.49 -1.28 -0.04 -2.57 - 0.77 2.89 -0.64
Gb_23533 (ATXR1)
0.22 -4.83 -5.06 0.68 0.59 -0.44 -3.27 -2.54 -5.68 -5.34 -4.68 -7.7 -4.24 -4.49 -3.5 -5.03 -4.72 -0.9 2.32 3.13
Gb_23592 (ATSPO11-1)
-1.11 -0.96 -1.12 - -1.04 0.49 1.38 -2.03 -1.57 -2.97 -1.19 -1.68 - -2.51 -1.31 2.07 - 0.06 2.72 -2.21
Gb_23961 (MAN6)
-4.14 -5.41 -3.01 -3.83 -3.2 -3.68 -2.11 -1.48 -8.55 -7.38 -4.89 -5.69 -5.54 -5.91 -3.79 -2.0 -0.71 0.68 3.02 3.03
-1.86 - - 0.81 0.17 -1.56 -2.35 -0.24 -1.51 -0.77 -0.98 -3.08 0.13 -0.12 -2.17 -0.48 -1.16 - 3.06 1.11
0.47 -0.77 -0.86 0.69 0.15 -0.63 -2.6 -0.38 -1.09 -1.07 -0.87 -2.11 -1.45 -1.56 -1.65 -1.99 -1.56 -0.45 2.9 0.71
-1.5 -4.08 -2.74 -0.02 0.92 0.85 -4.47 -1.13 -2.3 -2.3 -1.34 -3.41 -2.49 -2.62 -1.41 -2.1 -1.54 1.53 2.86 0.91
-1.25 -4.53 -2.48 -0.65 1.19 -0.37 -3.64 -1.52 -1.39 -1.3 -1.03 -3.16 -2.04 -1.89 -0.83 -1.5 -0.78 1.46 2.62 1.54
Gb_25239 (WIP4)
-2.17 -3.0 -1.85 -2.97 -1.36 0.04 -2.22 -2.81 -3.5 -4.14 -1.91 -3.34 -2.55 -2.25 -0.92 -2.87 -3.6 -0.41 3.66 1.29
Gb_26391 (FRU)
-1.04 -1.25 0.04 -1.47 0.15 -2.46 -1.19 -1.64 -2.93 -2.35 -2.54 -1.18 -1.65 -1.42 -3.4 -4.62 -4.59 -6.14 3.15 2.3
1.41 -0.99 -0.84 1.0 -0.35 -2.23 -5.64 -0.63 -1.9 -1.52 -3.02 -3.37 -2.57 -1.71 -2.24 -1.17 -1.36 -0.95 2.77 1.54
-1.75 - -4.2 1.26 -1.98 0.13 -4.2 -1.09 -3.09 -3.16 - -1.9 - - - -3.06 -3.03 2.2 1.8 2.71
Gb_27035 (cycp3;1)
-1.65 -3.27 - -0.71 -0.5 -4.09 0.53 -0.3 -2.93 -1.42 -0.86 -1.77 -2.25 -1.68 -3.07 -0.92 0.53 0.55 1.68 2.87
-0.17 0.83 - 0.12 -1.2 1.65 -3.19 -1.64 -1.15 -1.34 -0.22 -3.45 -3.92 -4.05 0.45 0.06 -1.27 -1.02 2.58 0.04
- - - -0.22 - -2.31 - -0.98 -3.5 -4.36 -3.55 - - - - -0.11 -2.4 0.3 3.64 1.76
Gb_27230 (LOX1)
0.99 -0.22 -0.25 0.53 0.08 -5.11 -5.77 -1.63 -1.32 -1.0 -8.53 -3.57 -7.77 -6.45 -9.75 -0.15 -0.97 -0.05 2.12 2.52
Gb_27297 (OTP82)
-0.19 - -2.74 -0.12 -1.24 -0.39 -3.0 -1.44 -1.72 -1.97 -2.77 -5.08 -1.59 -1.29 -3.18 -2.68 -2.94 -1.9 3.34 2.04
-3.42 -3.1 -1.41 -1.83 - 1.99 -2.07 -5.35 -6.01 -6.12 - - - - -3.79 - - - 3.87 -2.57
0.2 -0.42 -0.46 -0.43 -0.13 -3.23 -0.93 -0.88 -9.31 -9.26 -10.75 -9.08 -12.98 -9.52 -7.28 -8.19 -11.5 2.83 2.1 1.65
1.43 1.03 1.64 0.88 0.14 -7.88 -6.34 -2.88 - -13.0 - -12.63 - - -11.45 -9.56 -11.76 1.19 2.27 0.96
-2.57 -3.5 -4.67 -4.72 -4.13 - -0.61 -0.77 -8.17 -7.43 - -7.37 -6.22 - -5.98 -4.88 - 2.02 2.94 2.71
Gb_27690 (CYCP3;2)
0.06 1.41 0.82 0.04 -0.29 - -2.71 -2.49 - -2.4 -3.76 -2.79 - - - - - 0.84 2.27 2.41
1.4 0.15 -0.66 -1.14 0.69 -2.27 0.27 -0.34 -0.15 -0.75 -1.99 -2.17 -1.64 -2.33 -0.8 -2.91 -1.5 -0.6 2.59 0.18
1.36 - -5.46 -4.74 -1.12 -2.73 -2.51 -0.09 -0.42 -0.89 -3.14 -1.47 -0.5 -0.33 -3.44 -4.15 -3.52 -1.05 2.62 2.47
Gb_28318 (SIP2)
0.39 1.8 0.54 -0.46 -0.24 -1.32 1.98 -1.93 -4.65 -3.37 -3.54 -2.55 -5.43 -6.4 -3.57 -4.57 -4.66 0.57 1.22 1.66
-0.43 -0.66 -0.52 -0.12 0.38 0.33 -0.53 0.11 -1.19 -1.09 -0.93 -0.42 -0.95 -1.14 -0.74 -1.79 -1.07 0.96 1.48 1.78
-5.04 -4.07 -5.45 -4.85 -4.45 -4.32 -6.29 -2.86 -1.48 -2.38 -1.53 -3.88 -2.31 -3.28 -2.37 -1.33 -4.88 -0.41 3.04 3.12
-1.17 -16.94 -3.92 - 0.38 -3.13 -3.64 -1.72 -4.11 -1.65 - - - - - - - -17.49 4.11 -18.89
1.38 2.16 1.62 0.0 -0.35 - -0.26 -5.81 - - - -6.35 - - - - - -4.12 2.04 1.6
1.41 0.25 0.89 0.57 -0.71 -4.38 -0.62 -4.8 - -8.12 - -8.76 - - - -6.69 - -3.88 2.83 2.1
Gb_30759 (ORF240B)
- - - - - - - - - - - - - - - - - - 4.32 -
-0.43 -0.61 -0.93 -0.32 0.99 1.02 -1.04 -0.31 -1.46 -1.44 -0.16 -0.13 -1.15 -1.03 -0.19 -1.04 -0.6 -0.23 1.54 1.44
Gb_33007 (IMS1)
0.39 0.71 0.76 0.2 0.78 -2.73 1.13 -1.2 -0.81 -1.06 -0.82 -2.14 -0.78 -0.63 -0.88 -0.5 -0.74 -1.27 0.43 1.61
-8.42 -4.88 - -0.98 - - -4.45 0.59 -18.02 -0.95 -26.7 - 1.33 1.31 -10.92 - -29.5 - 3.09 1.96
Gb_34237 (UF3GT)
-3.07 - -6.39 -2.73 -6.24 - -3.77 -6.39 -6.52 -5.98 -6.94 - -8.15 - - - - -4.16 3.42 3.14
- - - - - - 0.22 -3.81 - - - - - - - - - 0.22 3.38 2.84
-1.46 -0.73 -1.21 0.58 -3.31 1.44 -4.29 -3.38 -3.28 -2.8 -1.12 - -4.76 -2.61 -1.8 - -2.49 - 3.66 -3.1
0.14 -0.25 -0.67 0.48 0.42 0.38 1.24 -1.39 -2.2 -2.32 -2.76 -1.41 -3.23 -2.12 -2.54 0.15 -0.77 0.49 1.54 1.68
-5.19 - - -2.94 -3.62 -0.05 -5.36 0.12 -0.76 -0.71 -2.49 -3.07 -1.07 -1.48 -2.42 -4.72 -1.6 -1.13 3.38 1.97
-5.25 -5.93 -6.02 - -7.0 -5.89 -4.95 -4.45 -7.04 -5.1 -4.82 -5.01 -4.16 -4.7 -3.84 - -5.59 -4.89 3.63 2.83
-0.55 -0.24 -0.86 -0.31 -0.25 -0.11 -0.01 -0.17 -1.25 -1.15 -0.17 -1.46 -0.32 -0.62 -0.15 -1.81 -1.47 -0.42 2.25 1.5
Gb_37187 (TCP3)
-2.15 -2.09 -0.69 -1.81 -0.18 -3.03 -4.53 -0.3 -1.2 -1.38 -3.31 -3.09 -3.23 -1.92 -2.93 -2.75 0.77 0.33 2.16 2.94
-0.06 0.02 0.65 -0.5 0.52 0.59 -1.95 -6.67 - - -4.23 - - -5.5 - - - -1.22 2.77 2.38
Gb_38112 (WIP5)
-2.98 -6.09 -6.38 -1.4 -1.53 -3.22 -10.1 -1.6 -2.14 -2.15 -1.72 -1.54 -1.28 -1.73 -1.47 -2.95 -0.95 -1.38 3.69 1.36
-0.29 -0.49 - 1.64 -1.49 - 0.63 -0.08 -1.72 -1.11 -0.37 -3.01 -1.31 -1.1 0.75 -1.95 -0.33 0.8 2.42 -2.74
0.74 -0.35 -0.63 0.09 1.04 -1.43 -1.14 -0.87 -1.47 -1.61 -1.1 -2.07 -1.5 -1.23 -1.21 -1.36 -1.51 -0.38 1.99 2.11
-2.93 -1.89 -4.33 -2.37 -1.07 -4.5 -6.23 -3.32 -4.76 -5.49 -4.3 -5.98 -4.54 -5.69 -2.95 -2.83 -5.13 -0.66 3.84 1.71
-1.89 -1.74 -2.78 -1.33 -0.16 -1.98 -6.84 -3.29 -3.66 -4.49 -4.02 -4.77 -5.73 -4.86 -2.87 -2.26 -3.44 -0.42 3.61 1.97
Gb_41561 (LOX1)
1.49 2.1 1.15 1.61 -0.22 -4.99 -6.64 -2.69 -2.74 -3.1 -3.83 -8.34 -4.05 -4.16 -4.84 -6.07 -3.46 -0.93 1.76 1.05

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.