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  5. Gb_34551

Gb_34551


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 113.0)


Gene families : OG0000009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_34551

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene37840.t1 UBP6, ATUBP6,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g19344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29078 ORF120 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29778 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_00288 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Gb_05294 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_08402 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_16799 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.01 OrthoFinder output from all 47 species
Gb_23548 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Gb_26132 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_26878 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_26975 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_28600 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_29350 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_30240 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_30314 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_30317 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 OrthoFinder output from all 47 species
Gb_33365 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_33414 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_38048 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 OrthoFinder output from all 47 species
Gb_38122 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_38136 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_40566 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!