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  5. Gb_33735

Gb_33735 (PDC2)


Aliases : PDC2

Description : pyruvate decarboxylase


Gene families : OG0001402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_33735
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
AT4G33070 No alias Thiamine pyrophosphate dependent pyruvate decarboxylase... 0.05 OrthoFinder output from all 47 species
AT5G01330 PDC3 pyruvate decarboxylase-3 0.04 OrthoFinder output from all 47 species
Als_g05001 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41262 PDC2 EC_4.1 carbon-carbon lyase & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50750 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09574 PDC2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003940001 PDC2 Carbohydrate metabolism.fermentation.alcoholic... 0.04 OrthoFinder output from all 47 species
Gb_08494 No alias Pyruvate decarboxylase 4 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_36228 No alias Pyruvate decarboxylase 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_36229 No alias Pyruvate decarboxylase 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os03g18220.1 LOC_Os03g18220 pyruvate decarboxylase 0.07 OrthoFinder output from all 47 species
LOC_Os05g39310.1 LOC_Os05g39310 pyruvate decarboxylase 0.07 OrthoFinder output from all 47 species
LOC_Os05g39320.1 LOC_Os05g39320 pyruvate decarboxylase 0.07 OrthoFinder output from all 47 species
MA_127819g0010 No alias pyruvate decarboxylase 0.03 OrthoFinder output from all 47 species
MA_398390g0010 No alias pyruvate decarboxylase 0.03 OrthoFinder output from all 47 species
Pnu_g05812 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g076510.2.1 Solyc10g076510 pyruvate decarboxylase 0.05 OrthoFinder output from all 47 species
Zm00001e001325_P003 Zm00001e001325 pyruvate decarboxylase 0.04 OrthoFinder output from all 47 species
Zm00001e025833_P001 PDC2, Zm00001e025833 pyruvate decarboxylase 0.02 OrthoFinder output from all 47 species
Zm00001e027278_P002 Zm00001e027278 pyruvate decarboxylase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0030976 thiamine pyrophosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012000 Thiamin_PyroP_enz_cen_dom 241 356
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom 46 210
IPR011766 TPP_enzyme_TPP-bd 451 576
No external refs found!