Gb_33705 (KNAT3)

Aliases : KNAT3

Description : transcription factor (KNOX)

Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_33705
Cluster	HCCA: Cluster_376

Target	Alias	Description	ECC score	Gene Family Method
AT1G62360	BUM1, SHL, STM,...	KNOX/ELK homeobox transcription factor	0.02	OrthoFinder output from all 47 species
Lfl_g12242	KNAT3	KNOX-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g35965	No alias	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e005547_P001	BP, BP1, KNAT1,...	transcription factor (KNOX)	0.03	OrthoFinder output from all 47 species
Zm00001e025100_P003	KNAT3, Zm00001e025100	transcription factor (KNOX)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005539	ELK_dom	276	297
IPR005541	KNOX2	168	217
IPR008422	Homeobox_KN_domain	316	355
IPR005540	KNOX1	109	150

External Links

No external refs found!

Gb_33705 (KNAT3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation