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Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 100.0)
Gene families : OG0000009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g33605 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_00288 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Gb_00777 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_04010 | ORF170 | Retrovirus-related Pol polyprotein from transposon TNT... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_05294 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_05523 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_06978 | ORF145A | Retrovirus-related Pol polyprotein from transposon TNT... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_13962 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_16799 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_22057 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_24597 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_25092 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_26878 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_26975 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Gb_27666 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_27945 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_30240 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_30261 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Gb_30314 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Gb_30317 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_33414 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_34551 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_38048 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_38122 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_38136 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_40566 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_40853 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_41697 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g27574 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g11194 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| MF | GO:0010333 | terpene synthase activity | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |