1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_33044

Gb_33044 (ABCG40, PDR12,...)


Aliases : ABCG40, PDR12, ATABCG40, ATPDR12

Description : Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia (sp|q949g3|pdr1_nicpl : 279.0)


Gene families : OG0002595 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002595_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_33044
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Aop_g19902 PDR6, ATPDR6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36860 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g43718 PDR6, ATPDR6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g43789 PDR6, ATPDR6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g58126 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72839.t1 PDR6, ATPDR6,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017186001 ABCG40, PDR12,... Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
LOC_Os09g16458.1 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_218328g0010 PEN3, ABCG36,... ABC transporter G family member 36 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_396327g0010 PIS1, ABCG37,... ABC transporter G family member 37 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_8453212g0010 PEN3, ABCG36,... Pleiotropic drug resistance protein 1 OS=Nicotiana... 0.04 OrthoFinder output from all 47 species
Nbi_g28498 PDR6, ATPDR6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g61713 PDR6, ATPDR6 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR029481 ABC_trans_N 84 140
IPR003439 ABC_transporter-like_ATP-bd 166 263
No external refs found!